Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5566g00003 ATGGGGAAGCGTCCACGTGGCTGCGCGGAAGGAGGAGGGCTGAACAGAGGAGCATGGACGGTTCAAGAGGACAAGTTACTGACTTCTTACATTGAGACACACGGCCAAGCCAAATGGACACGCATCCCTAAGGAGCTGGCTCAGATGGTTAACTATCTCGGGCCTGATATTAAAAGAGGCGGCATTACACAAGATGAAGAAGAACTCATCATTAGGCTTCATAAGCTTCTTGGTAACAGGTGGTCTCTCATAGCTGGAAGGCTACCTGGCCGAGCAGACAATGAAATCAAGAACTACTGGAACACCACTTTGGCCAAAAAGCTCAGAACACAGGCATGTTCAATATCTGAACAACATGGAACAATGAGATCAGCAGTAAACAATAAACCTGATGTACCAATCTATGAGATGAGAGAGGTTACATGCAACTGGGTTAAAGTTAAAGGCAGTAATATGTATTTTGGCCAAAAGGATATTAAAGATCTGCGTTCCGCGGGGTTTGACCCACAATATGATGCCTTGCTGGAATTCACGACGGGCCAGCATCTGATGCCAATTCGTATATTGCGCTGCTCAGCTAACATTGCACATGACAGTCCTCAATGGAACCAGTTCAGACCATTAACTTAA 630 0.4587 MGKRPRGCAEGGGLNRGAWTVQEDKLLTSYIETHGQAKWTRIPKELAQMVNYLGPDIKRGGITQDEEELIIRLHKLLGNRWSLIAGRLPGRADNEIKNYWNTTLAKKLRTQACSISEQHGTMRSAVNNKPDVPIYEMREVTCNWVKVKGSNMYFGQKDIKDLRSAGFDPQYDALLEFTTGQHLMPIRILRCSANIAHDSPQWNQFRPLT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5566g00003 209 ProSiteProfiles Myb-like domain profile. 11 46 IPR001005 -
Pral5566g00003 209 SMART sant 58 106 IPR001005 -
Pral5566g00003 209 SMART sant 15 55 IPR001005 -
Pral5566g00003 209 SUPERFAMILY Homeodomain-like 14 100 IPR009057 -
Pral5566g00003 209 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Pral5566g00003 209 Gene3D - 13 50 - -
Pral5566g00003 209 Pfam Myb-like DNA-binding domain 62 103 IPR001005 -
Pral5566g00003 209 Pfam Myb-like DNA-binding domain 16 46 IPR001005 -
Pral5566g00003 209 CDD SANT 63 104 IPR001005 -
Pral5566g00003 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Pral5566g00003 209 Gene3D - 63 130 - -
Pral5566g00003 209 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5566g00003 Pral-Chr5566 49670 54442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5566g00003 1 112 MYB Transcription Factor Family AT3G13540 53.279 3.63e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5566g00003 Myb_DNA-binding 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5566g00003 K09422 - pda:103712648 163.696