Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5565g00003 ATGGACTGCAAAGGCACAGCTGTGCTTGGTTCAATTGGGCACAATGCACCAGAATACCTCTCCACTGGAATGTCTTCGGAGAAGTCTGATGTCTTTGGTTACGGTGTGATGCTTCTTGAACTAATGACTGGACAGATGGCTTTAGTTCGTGCACGACTTGGCAATGATGATGATGTCATGTTAATTGATTGGATAGGGCTAGCGAAAGACAAGAAATTGGTAACACTAATGGATGCTGAGTTGGGCGATGAATATAATGAAGAGGAGGCAGAGCATTTAGTCAAAGTGGCCTTGCTATGCACTCAAAACTCGTTTATGGGAAGACCAACGATGTCTGAGGTGCTAAGGATGCTTGAAGGTGATGGGCTTGAGGAAAAATGGGATAAATGGCAGAAAGACGAGACGTGTCCATTAGGTAATGGAACCCTTCTTTGCTACTCCCAAGTGACCTTCTCTCGTTCGCCAATTCTAGACTCAGATTCAGATATCCTCCCAGAAGAACTGTCAGGTCCTAGATGA 519 0.4509 MDCKGTAVLGSIGHNAPEYLSTGMSSEKSDVFGYGVMLLELMTGQMALVRARLGNDDDVMLIDWIGLAKDKKLVTLMDAELGDEYNEEEAEHLVKVALLCTQNSFMGRPTMSEVLRMLEGDGLEEKWDKWQKDETCPLGNGTLLCYSQVTFSRSPILDSDSDILPEELSGPR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5565g00003 172 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5565g00003 172 Pfam Protein tyrosine and serine/threonine kinase 12 118 IPR001245 GO:0004672|GO:0006468
Pral5565g00003 172 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 6 123 - -
Pral5565g00003 172 SUPERFAMILY Protein kinase-like (PK-like) 6 125 IPR011009 -
Pral5565g00003 172 Gene3D Transferase(Phosphotransferase) domain 1 2 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5565g00003 Pral-Chr5565 47231 47913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5565g00003 6 172 Receptor kinase-like Gene Family AT1G34210 60.465 2.32e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral5565g00003 PK_Tyr_Ser-Thr 1.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5565g00003 K13416 - gmx:100800522 201.83