Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5565g00002 ATGGGCAATAGTGCTACCGGAGCTATTGCTGGATTAATGTCTACAGTGTTCGCAAGGACACTTGGTTATCGCCGGAAGAGGACAACACAAGATTATCTCTTTGATGTTCCTGGCAAGTTGAAGAATAATGGAAAAGATGCCGAGGAGCATCCTAAAATTCACCTTAGTCAGCTTAGAAAGTTTTCCCTGCGTGAGCTGCAAGATGCAACGGACAACTTTAGTAACAAAAAGATTGTGGGCAAAGGTGGATCTGGTGAGGTTTACAAAGGACGATTGGCTAATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAAGGCGCTCGGTTTGGAGAGGTGCAATTTCAAACAGAAGTACACATCATCAGCCTGGCAGTCCATCGTAACTTGCTGCGGCTGCGTGGTTATTGCAAGACCCCAACTGAATGGTTGCTTGTATATCCTTTCATGGCCAATGGTAGTGTGGCATTGTGTTTACGAGCCCGCCCGAAGTCACGGCCCCCGCTTGATTGGCCTGTACGGAAGCGAATCGCACTGGGAGTCGCAAGGGGGCTTGCTTATTTGCATAATCATTGTGATCCAAAGATCATTCACCGTGATGTCAAAGCTGCCAATATACTATTGGATGAGGAGTTTGAAGCAGTTCTTGGGGACTTTGGCTTTGCAAAACCCATGGACTACGAAGACACAGCTGTGCTTGGTTCAGTTGGGCACATTGCACCAGAATACCTCTCCACCGGAATGTCTTCGGAAAAGTCTGATGTTTTCAGTTATGGTGTGATGCTTCTTGAACTATTAACTGGACAGATGGCTTTAGTTCGTGCACGACTTGGCGATGATGATGATGTCATGTTAATTGATTGGGTGATAGGGCTTTTCAAAGACAAGAAATTGGAAACACTAATGGATGCTGATTTGGGCTATGAATATAATGAAGAGGAGGCAGAGCATTTAATCAAAGTGGCCTTACTATGCGCACAAAACTCGGTTATGGAAAGACCAACGATGTCTGAGGTGCTAAAGATGCTTGAAGATGATGGGCCTGATGAAAAATGGGGTGAATGGCAGAAAGACGGGACGGGTCCATTAGTTGACGGAACCCTTCCTTGCTACTCCCAAGTGAACTTCTCTAGCCCGCCAATTCTAGACTCAGATTCAGATATCCCCCCAGACGAACTGTCAGGTCCCAGATGA 1194 0.4615 MGNSATGAIAGLMSTVFARTLGYRRKRTTQDYLFDVPGKLKNNGKDAEEHPKIHLSQLRKFSLRELQDATDNFSNKKIVGKGGSGEVYKGRLANGSLVAVKRLKEEGARFGEVQFQTEVHIISLAVHRNLLRLRGYCKTPTEWLLVYPFMANGSVALCLRARPKSRPPLDWPVRKRIALGVARGLAYLHNHCDPKIIHRDVKAANILLDEEFEAVLGDFGFAKPMDYEDTAVLGSVGHIAPEYLSTGMSSEKSDVFSYGVMLLELLTGQMALVRARLGDDDDVMLIDWVIGLFKDKKLETLMDADLGYEYNEEEAEHLIKVALLCAQNSVMERPTMSEVLKMLEDDGPDEKWGEWQKDGTGPLVDGTLPCYSQVNFSSPPILDSDSDIPPDELSGPR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5565g00002 397 ProSiteProfiles Protein kinase domain profile. 73 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5565g00002 397 FunFam Somatic embryogenesis receptor-like kinase 1 150 361 - -
Pral5565g00002 397 SMART serkin_6 73 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5565g00002 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Pral5565g00002 397 Gene3D Phosphorylase Kinase; domain 1 43 149 - -
Pral5565g00002 397 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 55 352 - -
Pral5565g00002 397 FunFam Somatic embryogenesis receptor kinase 1 43 149 - -
Pral5565g00002 397 Pfam Protein kinase domain 74 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5565g00002 397 SUPERFAMILY Protein kinase-like (PK-like) 52 344 IPR011009 -
Pral5565g00002 397 ProSitePatterns Protein kinases ATP-binding region signature. 79 101 IPR017441 GO:0005524
Pral5565g00002 397 Gene3D Transferase(Phosphotransferase) domain 1 150 360 - -
Pral5565g00002 397 MobiDBLite consensus disorder prediction 376 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5565g00002 Pral-Chr5565 39543 41468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5565g00002 12 397 Receptor kinase-like Gene Family AT4G33430 65.641 1.45e-172 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral5565g00002 Pkinase 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5565g00002 K13416 - twl:119982367 512.686