Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5563g00008 ATGGTGAGGGGGAAGCTTATACTGATCAGCCAATCTGGTGGTAAATTTTTAACAAATGACGATGGATCTATGTCATATACTGGAGGCGAAGCGCATGCGGTGGAGATTAATCATGAAACGACTTTTGAAGATCTCAAACTAAAACTTGCTGAATTATGGAACTTACTAAGTAAGACCCTGTCCATCAAGTATTTTCTTCCGGGGAACAGGAAAACTTTAATCTGTATATCAAATGATCGAGACCTGAAGAGGATGAAAGAATATTATGTGGATTCAATTACTGCTGACGTTTTTATTTCTGGGACAAAAGGTTTTGACCAGGAATCCTTGAACATGAATACCAGGAGAAATGATATAAACGTAGCCGAAGCAGTGACCCCTGTCAATCCTTCAAAAACAAAACCTAAGACTGTTCGCAAACAAACAGCATCAGTAGGCACTTCTGCAAACCGTTCTCCAAATCATGCTGTTACTACTAATCATGGCGCTGCCTGTTCCAATCCGCCTTGTTCTGTTTCCATTGCCACTGATACATCCTCTCATGGCCGAGTCATCAGTGATATGGATGCTAGTCCTGCAGATGCAGTTAAGAAGCGAAGGCGTGCTGCATCTCGGGCACTTACTGCAAATGGTCCGTCTATGAATGCAGAAGAAAGTAAAAAAGTGATGTCACGGAAAAAGAATAAAAGAAATCATGCTGCTGCTGCTGCTGATAATAGAGAGGACCAGCTATATTTGCCATGTAATGACTATTCTGACAATTTGCTTGATGTTGGATCTGACATAACTCCGGGAAAATTAGCTGAATGTTGGAAAGACAGTATTACTGGTGTTGGACAGGACTTTCCAAGTGTCCAAGAATTTCGTGACGCCTTGCAGAAATATGCCATGGCACATCATTTTGCCTATAGGTATATCAAGAATGACACAGTTCGTGCCAGAGCCAGATGTGTATGTGAAGACTGCCCATGGAGGATTTTTGCTTCCTGGGTTCCATCTGATCAATCATTTAGAATTAAAAAGATGGAGGAGCCACATACTTGTGGAGGAAAATCTTGGAAGTCTACTCATCCCTCAAAGAACTGGTTGGTAAATGTTGTAAAGGACAGGCTACGAGATAACCTTCATCATAAAACAAAGGAGATTGCAAGTGCCATTCACCGAGACTTTGGGATTGAGTTGAATTACTCTCAAGTATGGCGTGCGGTTGAGGAAGCTAGGGAACAACTGCAAGGTTCATACAAAGAAGCATATAATCAGTTGCCTAGGCTTTGCGAGAGGATGTTAGAGTCAAATCCTGGCAGCTGTATCAAGCTCGTCACAGGTGATGACAAAAGATTTCAGCGTCTTTTTTTGTCGTTTCATGCTCTGATACGAGGATTTCAGGCTGGTTGCCGCCCTCTTCTATTCCTTGATTCGTCATCTTTGAAATCAAAATATCATGAGGTTTTATTGACAGCCACTTCACTAGATGGTGATGATGTTGCTTTCCCTGTTGCTCTGTGTATAGTTGATGTTGAGAATGATGATAACTGGAATTGGTTTCTAGAGCAGTTGAAACTTGCATTACCGACTTCCCAGCCTATGACTTTTGTGTCTGACAGAGAGAAGAACTTAAAGCAATCAGTTCTAAAGGTATTCCAAAATGCCCAACACGGTTATTCCATGTACCACCTCCTTGACAGTTTCAAGAAAAGTCTGAAGGGCCCTTACCATGGGGAAGGCAGGCCTTCTTTGCCAGTTAATTTCCTATCTGCTGCTCATGCACTGCGGCTCGATGGTTTCAAAATGTTCTTAGAACAGATTAGAAAAGTTTCTACAACAGCATATGATTGGGTCATGGAAGTTGAACCAGAGCAATGGGCAAGTGCAGTATTCAAAGGTGAGCGATACAATCATATTCTCGTAAACGTCGCTGAGTTATACACCATGTGGATTGACGAAGTGCGAGAGGTACCTATAGCACAAAAGGTAGAAGCTCTTGTATGTAAGATCGTGGAGTTAATAAACAATCGTCGAGCAGATTCAAGTAGTTGGACATTGAGACTGACTCCGTCAAAGGAGGAACTGCTGCAAGACGAATCCCTCAGGGCACAAGGCCTTAAAGTCTTGTTCTCATCAGACACCTTGTTTGAGGTTCATGATGACTCTGTCCGCGTTGTGGATATTGAAAAGTGGGACTGTAGCTGTTTGAGATGGAAAGCAACAGGGCTGCCATGCTGCCATGCTATAGCTGTCTTGAATTGCACCCATCGAAGTGTATATGACTACTGTGCGAAATACTTCACAGCTGATAACTTCCATCGCGTGTACTCTGAATCCATAAATCCTGTTTTTGATTATTTATCCATGAATCCTGCTTCTGATGATTTGAACAACGAGGAGGAAGCTAAGGAGGAGACAGAGATAGAGACTGAGAATAATGTACTTCCTCCTTGCAATTCTAGACCTTATGGCCAAAATAAGAAAGATGAGAATAAAACACCAAAGAAATCTAGGAAGACTGTCACATGTACCAAGTGCAAAGGAACAGGCCATAATAAGGCTACTTGTAAAGAGGCATCGTGA 2568 0.4217 MVRGKLILISQSGGKFLTNDDGSMSYTGGEAHAVEINHETTFEDLKLKLAELWNLLSKTLSIKYFLPGNRKTLICISNDRDLKRMKEYYVDSITADVFISGTKGFDQESLNMNTRRNDINVAEAVTPVNPSKTKPKTVRKQTASVGTSANRSPNHAVTTNHGAACSNPPCSVSIATDTSSHGRVISDMDASPADAVKKRRRAASRALTANGPSMNAEESKKVMSRKKNKRNHAAAAADNREDQLYLPCNDYSDNLLDVGSDITPGKLAECWKDSITGVGQDFPSVQEFRDALQKYAMAHHFAYRYIKNDTVRARARCVCEDCPWRIFASWVPSDQSFRIKKMEEPHTCGGKSWKSTHPSKNWLVNVVKDRLRDNLHHKTKEIASAIHRDFGIELNYSQVWRAVEEAREQLQGSYKEAYNQLPRLCERMLESNPGSCIKLVTGDDKRFQRLFLSFHALIRGFQAGCRPLLFLDSSSLKSKYHEVLLTATSLDGDDVAFPVALCIVDVENDDNWNWFLEQLKLALPTSQPMTFVSDREKNLKQSVLKVFQNAQHGYSMYHLLDSFKKSLKGPYHGEGRPSLPVNFLSAAHALRLDGFKMFLEQIRKVSTTAYDWVMEVEPEQWASAVFKGERYNHILVNVAELYTMWIDEVREVPIAQKVEALVCKIVELINNRRADSSSWTLRLTPSKEELLQDESLRAQGLKVLFSSDTLFEVHDDSVRVVDIEKWDCSCLRWKATGLPCCHAIAVLNCTHRSVYDYCAKYFTADNFHRVYSESINPVFDYLSMNPASDDLNNEEEAKEETEIETENNVLPPCNSRPYGQNKKDENKTPKKSRKTVTCTKCKGTGHNKATCKEAS 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5563g00008 855 Pfam MULE transposase domain 469 560 IPR018289 -
Pral5563g00008 855 Pfam PB1 domain 23 91 IPR000270 GO:0005515
Pral5563g00008 855 SMART PB1_new 19 102 IPR000270 GO:0005515
Pral5563g00008 855 MobiDBLite consensus disorder prediction 124 166 - -
Pral5563g00008 855 SUPERFAMILY CAD & PB1 domains 20 92 - -
Pral5563g00008 855 Pfam SWIM zinc finger 717 749 IPR007527 GO:0008270
Pral5563g00008 855 Pfam MuDR family transposase 275 339 IPR004332 -
Pral5563g00008 855 MobiDBLite consensus disorder prediction 183 236 - -
Pral5563g00008 855 ProSiteProfiles Zinc finger SWIM-type profile. 719 751 IPR007527 GO:0008270
Pral5563g00008 855 PANTHER POLYPROTEIN, PUTATIVE-RELATED 271 781 - -
Pral5563g00008 855 SMART 26again6 726 753 IPR006564 GO:0008270
Pral5563g00008 855 MobiDBLite consensus disorder prediction 801 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5563g00008 Pral-Chr5563 40790 44722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5563g00008 2 89 MAP Kinase Kinase Kinase AT1G79570 32.222 4.11e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5563g00008 - - pcin:129321032 1482.23