Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5555g00009 ATGGCAACTTTTTTCAACTCAATCTTATTATTACCATCACTTCTTCTTTTAGTTGTTCCATTCTTGTTTTCCTCTTTGGCTTCTGCTTATTCTTTCAATGACATCAAATTATGGTGTAGCCAAACCCCTAATCCTCAACCATGTGAGCATTTCTTGAACCAAAACCCTACCCACCAACACAAACCCTTAAACAACAAAGATGATTTCTTCAAGCTTTCTCTACAGCTCGCTCGGGATCGAGCTCTCATCAGCCATCAAAGCGTGGTTTTGCTCGGCCCTAAGTGCCGGAACCAAATGGAAAAGCTTGCATGGGCCGATTGCCTTGAGTTGTATGATCATACCATTCTCAAACTCAACAAAACCCTAAACCGTAACCCTAGCTGCACCCAAAGTGATACGCAAACATGGCTCAGCTCAGCTCTCACAAATCTTGAGGCATGTAAATCTGGGTTTTATGAACTTGGGGTTCAAGACAATGTATTGCCTTTGATGGCCAATAATGTCTCCAACTTGCTAAGCAACACTTTGGCTTTAAACAAGATTCCATACGAAGAACCAAGTTATAAAGATGGGTTCCCAACATGGGTCAAGCCAGGTGACCGGAAGCTGTTGCAGAGTTCTTCTCCATCTTCTCATGCAAACATCGTGGTGGCTAAAGACGGCTCCGGCCACTTCACAACCGTTAGTGCTGCCATAAATGCTGCACCAAAGAGTAGCAGTGGGAGGTATGTTATATACGTGAAGGCAGGAATATACAACGAACAAGTTGAGATCAAACTAAACAATATCATGTTAGTGGGAGATGGTATTGGAAAGACTATAATCACAGGAAGCAAAAGTGTTGGAGGAGGCACTACTACCTTCCGTTCTGCGACTGTCGCTGTTGTTGGAGATGGCTTTATTGCTCAAGACATGACATTCAGAAACACTGCTGGAGCATCAAACCACCAAGCCGTAGCATTACGTTCAGGTTCAGACTTATCAGTATTTTACAGATGCAGCTTTGAAGGCTACCAAGACACATTGTATGTGTTCTCTGAGAGACAATTCTACAGAGAATGTGACATTTATGGCACTGTGGATTTCATCTTTGGAAACGGAGCCGTGGTTTTTCAAAACTGCAACATTTTTGCAAGAAACCCTCCAAACAAAATCAACACAATCACAGCTCAAGGCCGAACTGATCCGAACCAAAACACAGGAATTTCCATTCATAACTGTAAAGTTACGGCTGCTTCAGACTTAAAACCAGTTCAGAGCTCTGTGAGAACCTATCTTGGAAGGCCATGGCAACAATATTCTCGAACAGTTTTCATGAAGACTTTCTTGGACAGTTTGGTTGATCCTTCTGGTTGGCTGGAATGGAGTGGTAATTTTGGCTTAAGCACTTTGTACTATGGAGAGTACATGAACACTGGTTCAGGTTCATCCACTGCAAATCGTGTTAAGTGGGCTGGCTTTCATGTGATTTCTAGTGCCTCTGAAGCTTCAAAATTTACTGTGGCAAACTTCATTGGAGGAAGTTCATGGTTGCCAGCCACCAACGTTCCTTTCACTTCTAGCTTATAG 1569 0.4289 MATFFNSILLLPSLLLLVVPFLFSSLASAYSFNDIKLWCSQTPNPQPCEHFLNQNPTHQHKPLNNKDDFFKLSLQLARDRALISHQSVVLLGPKCRNQMEKLAWADCLELYDHTILKLNKTLNRNPSCTQSDTQTWLSSALTNLEACKSGFYELGVQDNVLPLMANNVSNLLSNTLALNKIPYEEPSYKDGFPTWVKPGDRKLLQSSSPSSHANIVVAKDGSGHFTTVSAAINAAPKSSSGRYVIYVKAGIYNEQVEIKLNNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQDMTFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVFSERQFYRECDIYGTVDFIFGNGAVVFQNCNIFARNPPNKINTITAQGRTDPNQNTGISIHNCKVTAASDLKPVQSSVRTYLGRPWQQYSRTVFMKTFLDSLVDPSGWLEWSGNFGLSTLYYGEYMNTGSGSSTANRVKWAGFHVISSASEASKFTVANFIGGSSWLPATNVPFTSSL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5555g00009 522 NCBIfam pectinesterase inhibitor domain 11 180 IPR006501 GO:0004857
Pral5555g00009 522 ProSitePatterns Pectinesterase signature 1. 239 258 IPR018040 -
Pral5555g00009 522 SMART PMEI_2 30 178 IPR006501 GO:0004857
Pral5555g00009 522 SMART complete 247 425 IPR006633 -
Pral5555g00009 522 FunFam Pectinesterase 208 522 - -
Pral5555g00009 522 ProSitePatterns Pectinesterase signature 2. 356 365 IPR033131 -
Pral5555g00009 522 PANTHER PECTINESTERASE 14 514 - -
Pral5555g00009 522 SUPERFAMILY Pectin lyase-like 209 519 IPR011050 -
Pral5555g00009 522 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 181 IPR035513 -
Pral5555g00009 522 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 181 IPR035513 -
Pral5555g00009 522 Pfam Plant invertase/pectin methylesterase inhibitor 34 178 IPR006501 GO:0004857
Pral5555g00009 522 Gene3D - 209 522 IPR012334 -
Pral5555g00009 522 Pfam Pectinesterase 214 507 IPR000070 GO:0030599|GO:0042545
Pral5555g00009 522 CDD PMEI-like_3 37 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5555g00009 Pral-Chr5555 225082 227232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5555g00009 16 522 Carbohydrate Esterase AT2G45220 66.339 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5555g00009 K01051 - gmx:100781697 838.565