Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5555g00008 ATGTTGGTGGGAGATGGCATTGGGAAGACTATAATCACAGGAAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGGTCAGCCACTGTTGCTGTTGTTGGGGATGGATTTATTGCTCAAGGAATCACATTTAGAAACACTGCTGGAGCTTCAAATCACCAAGCTGTTGCCCTGCGTTCAGGTTCAGATCTATCAGTTTTCTACAAATGCAGCTTTGAAGGATACCAAGACACATTATATGTGCACTCTGAGAGACAATTCTACAGAGAATGTAACATCTATGGCACTGTGGATTTCATCTTTGGAAACGCAGCCGTAGTTTTCCAGAACTGCAACATTTTCGCTAGAAACCCTCCAAACAAAGTAAACACAATCACAGCACAGGGCCGAACTGATCCGAACCAAAACACTGGAATTTCCATTCATAACTGTAGAATTACGGCTGCTTCAGAGCTAAAAGCAGTCCAGAGCTCTGTGAGGACCTATCTTGGAAGGCCATGGAAGCAATATTCTCGAACAGTGATTATGAAGAGCTTTCTTGATAGTTTGATAAACCAGGCTGGTTGGCTGGAATGGAGTGGTAACTTTGCGTTGAACACTTTATATTATGGGGAGTATATGAACACTGGTTCAGGTTCTTCCACTGCAAATCGAGTTAAGTGGTCAGGTTTCCACGTAATTACCAGTGCTTCAGAAGCTTCAAAATTCACCGTTGGGAATTTCATAGCCGGCAATTCATGGTTGCCAGCCACCAGTGTTCCTTTTACGTCTGGCTTATAA 780 0.4372 MLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGASNHQAVALRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECNIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCRITAASELKAVQSSVRTYLGRPWKQYSRTVIMKSFLDSLINQAGWLEWSGNFALNTLYYGEYMNTGSGSSTANRVKWSGFHVITSASEASKFTVGNFIAGNSWLPATSVPFTSGL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5555g00008 259 ProSitePatterns Pectinesterase signature 2. 93 102 IPR033131 -
Pral5555g00008 259 Pfam Pectinesterase 1 245 IPR000070 GO:0030599|GO:0042545
Pral5555g00008 259 Gene3D - 1 259 IPR012334 -
Pral5555g00008 259 PANTHER PECTINESTERASE 1 251 - -
Pral5555g00008 259 FunFam Pectinesterase 1 259 - -
Pral5555g00008 259 SUPERFAMILY Pectin lyase-like 1 258 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5555g00008 Pral-Chr5555 219452 243024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5555g00008 1 259 Carbohydrate Esterase AT2G45220 78.378 1.02e-148 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5555g00008 K01051 - gmx:100783428 475.707