Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5555g00005 ATGGCAGCTTTTCGCCTTTTCATGCGCAAGGCCTTTGTGTTATTTGTTCCCTTATTTCTACTTTGTAGTTCTTCTGTTTCTGGGTATTCATGGAATGAGGTTAAGGTTTGGTGCAAGCAAACCCCAAATCCTCAACCGTGTGAGTACTTCATGAACAACAATCCCATTCACAGCCAAAAGATCATCAAACACAAAGATGATTTTCTCAAGCTTTCTCTTCAAGTAGCCCAGGAGAGAGCCCTGAAAGGCCATGCAAACACTGTTTCATTAGGACCAAAATGTAGGAACTCACGTGAGAAAGCTGCATGGGCTGATTGCATAGAGCTTTACGAGCAAGCCATTGATAAACTCAACAAAACCCTAAACCCCAACCCCAAGTTCTCCCAAGAAGACGCTCAAACATGGCTCAGCACGGCTCTTACCAACATCGAGACGTGCCGAGCCGGCTTCTATGAGCTGGGAGTTCAAGACTACGTGTTGCCTTTGATGTCCAACAATGTCACCAAGTTGTTGAGCAACACTTTGGCTCTGAACAAAGTTGAATACAAAGGGCCAAGTTATAAAGAAGGGTTTCCAACGTGGGTTAAGCCTGGAGATAGGAAGTTGTTGCAGTCTTCTTCATCTTCTTTTCGGGCCAATGTTGTTGTGGCCAAAGATGGATCTGGCAAATACGCAACTATAACTGCTGCTATAAATGCAGCACCAAAGAGTAGTGGTGGGAGATATGTGATATATGTGAAGGCCGGAATCTACAACGAACAGGTAGAGATAAAGGCAAAGAATATAATGTTGGTGGGAGACGGCATTGGGAGGACTATAGTCACAGGAAGTAAAAGTGTTGGAGGAGGCACTACTACCTTCCGGTCAGCCACTGTTGCTGTTGTTGGGGATGGGTTTATTGCACAAGGCATCACATTTAGAAACACTGCTGGAGCTTCAAATCACCAAGCTGTTGCCCTACGTTCTGGTTCAGATTTATCAGTTTTTTACAGATGCAGCTTTGAGGGATACCAAGACACATTGTATGTGCACTCTGACAGACAGTTCTATAGAGAATGTGACATTTATGGCACTGTGGATTTCATCTTTGGAAACGCAGCTGTGGTTTTCCAGAACTGCAACATTTTCGCTAGAAACCCTCCAAACAAAGTCAACACAATCACGGCACAAGGCCGAACTGATCCAAACCAAAACACTGGAATTTCTATTCACAACTGTAAAGTTATGGCTGCTTCAGACTTAAAAGCAGTTCAGAGCTCTGTGAGAACCTATCTTGGAAGGCCATGGAAGCAATATTCTCGAACAGTGATTATGAAGAGCTTTCTTGATAGTTTGGTAAACCAGGCTGGTTGGTTGGAATGGAGTGGTAATTTTGCGTTGAACACTTTATATTATGGAGAGTATATGAACACTGGTTCAGGTTCTTCCACTGCAAATCGAGTTAAGTGGTCAGGTTTCCACGTAATCGCTAGTGCTTCAGAAGCTTCAAAGTTCACTGTTGGGAACTTCATTGGAGGAAATTCATGGTTGCCAGCCAGCAGTGTTCCTTTCACCTCTGCTTTATAG 1566 0.4381 MAAFRLFMRKAFVLFVPLFLLCSSSVSGYSWNEVKVWCKQTPNPQPCEYFMNNNPIHSQKIIKHKDDFLKLSLQVAQERALKGHANTVSLGPKCRNSREKAAWADCIELYEQAIDKLNKTLNPNPKFSQEDAQTWLSTALTNIETCRAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVEYKGPSYKEGFPTWVKPGDRKLLQSSSSSFRANVVVAKDGSGKYATITAAINAAPKSSGGRYVIYVKAGIYNEQVEIKAKNIMLVGDGIGRTIVTGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSDRQFYRECDIYGTVDFIFGNAAVVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCKVMAASDLKAVQSSVRTYLGRPWKQYSRTVIMKSFLDSLVNQAGWLEWSGNFALNTLYYGEYMNTGSGSSTANRVKWSGFHVIASASEASKFTVGNFIGGNSWLPASSVPFTSAL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5555g00005 521 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Pral5555g00005 521 CDD PMEI-like_3 37 179 - -
Pral5555g00005 521 FunFam Pectinesterase 29 180 - -
Pral5555g00005 521 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 180 IPR035513 -
Pral5555g00005 521 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 180 IPR035513 -
Pral5555g00005 521 Pfam Pectinesterase 213 507 IPR000070 GO:0030599|GO:0042545
Pral5555g00005 521 Pfam Plant invertase/pectin methylesterase inhibitor 34 177 IPR006501 GO:0004857
Pral5555g00005 521 Gene3D - 207 521 IPR012334 -
Pral5555g00005 521 FunFam Pectinesterase 207 521 - -
Pral5555g00005 521 PANTHER PECTINESTERASE 19 511 - -
Pral5555g00005 521 SUPERFAMILY Pectin lyase-like 209 518 IPR011050 -
Pral5555g00005 521 ProSitePatterns Pectinesterase signature 1. 238 257 IPR018040 -
Pral5555g00005 521 SMART PMEI_2 29 177 IPR006501 GO:0004857
Pral5555g00005 521 NCBIfam pectinesterase inhibitor domain 11 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5555g00005 Pral-Chr5555 197590 199615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5555g00005 1 521 Carbohydrate Esterase AT2G45220 66.858 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5555g00005 K01051 - gmx:100783964 872.463