Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5555g00002 ATGAGTCATGAAAGTAATATATTGATGGAGAAGAATCCCCGAGTTTTTATGGATGTTTCTATAGGTGGGGTTGATGCTGGAAGAATGATTTTTGAGCTATTCAAAAAGCTTGCCCCATTCACTGCAGAAAATTTCCGTGCACTATGTACAGGAGAAAAGGGAATGGGTAAGAAAGTTGGTTTGCCCTTGCACTATGAGGGTTCTTTCTTTTATGGCATTCAGAAAGGCTGGTCCATTGCGAAGAGTGGGAAACGCCGCTTCATTGTGAAGGGTGGGAAATGCCGTTCCATTGTGAAGGGTGGTGATTTTTTTGGTCCGGGTGGTGATTGTGGTGAAAGCATATATGGAGCAGATTTTCCAGCTGAGAGCACTCAGCTTCAACACTGTGAGCGAGGACTTCTGTCCATGGCAATTACTGATCGTTTTGGCCTTGGCTCACAATTTGTGATCACATTACAACCTGATGACAGTCTTGACAGGTTTCATATGGTTTTTGGGAAGCTTATTAAGGGATTTAATACATTGAAGAAGATTGAAGAAGCTATTCTTGAAGCTGCTTATGCGAAGCCTGTGTGGGTCTTCAACTGCGGTGAATGTTGTGGAAGCGACGATGTTGTAGCTGAGAAACGCAACCCTGGAGATCATTCTCTAAATAATGTGGAAGCAAGGGCTTACGCAGCTGCTAAAAAGCCACGGCCAAATCCTGGTCCATCCTGTTTTCCAAAGAGGCATAGATCCGAGAAAAAATGCTCTTGTTGCTTTGACGTACCAGACCCATAA 780 0.4385 MSHESNILMEKNPRVFMDVSIGGVDAGRMIFELFKKLAPFTAENFRALCTGEKGMGKKVGLPLHYEGSFFYGIQKGWSIAKSGKRRFIVKGGKCRSIVKGGDFFGPGGDCGESIYGADFPAESTQLQHCERGLLSMAITDRFGLGSQFVITLQPDDSLDRFHMVFGKLIKGFNTLKKIEEAILEAAYAKPVWVFNCGECCGSDDVVAEKRNPGDHSLNNVEARAYAAAKKPRPNPGPSCFPKRHRSEKKCSCCFDVPDP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5555g00002 259 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 14 198 - -
Pral5555g00002 259 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 16 190 IPR002130 GO:0000413|GO:0003755
Pral5555g00002 259 MobiDBLite consensus disorder prediction 225 247 - -
Pral5555g00002 259 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 191 IPR002130 GO:0000413|GO:0003755
Pral5555g00002 259 SUPERFAMILY Cyclophilin-like 9 199 IPR029000 -
Pral5555g00002 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 33 48 IPR002130 GO:0000413|GO:0003755
Pral5555g00002 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Pral5555g00002 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Pral5555g00002 259 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 175 IPR002130 GO:0000413|GO:0003755
Pral5555g00002 259 Gene3D - 2 205 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5555g00002 Pral-Chr5555 91509 97050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5555g00002 7 179 U-box Gene Family AT5G67530 31.034 1.93e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5555g00002 K09566 - qsa:O6P43_019424 179.104