Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5553g00012 ATGAAGGAAAACCACACACTGAAGTTATGCAAGTATGTTCTGAGCTTTGTGATGCATCTCTCCTTTCTATTAACTACTTTGAAAACCTGTTCTTCAACGGATATCCCTTCAGATAGAATCCTCCTCGACTGTGGTTCTTTAAAAGCATCGCAATTCAATGGAGCAGAATGGATAGGTGACACTCACAACCATTTTTTGCCTCCAGCGTACGACGAAATATCTTCTGCACGCTTCATCTCAAACCTGAGCTCTGAAGTTCCAGAGATCCCATACTCAACCGCACGCGTGATTCATTCTCCATTCACATACTCTTTCCCCTTCTCCCATGTCCTTGTATTCATCCGTTTTTACTTTCTTTCAACTTCATACCTGGGACTAAGCCCCTCGAAGGCTTACTTTTCTGTTAAAACCGGTCCTTACACTCTGTTGAGTCATTTCAGCCCCTCTATTGCTGCTAACGATATCAAGTCAGGCTTCTTCACTAAGGATTTCTTAGTCAACGTCAAGGCAAAGAGACTTGACATAATTTTCATCCCAGAATCTCTAGTTTCCAATGCACTTGCCTTCGTAAATGGTATTGAGATCTTCTCGGTGCCTCTCAGTATTTACTTTCCAGGTCCCCACAGCCCCCTTCCTTGTGTTGGGCATCGGGTACCTTTCTTCATTAATGATGACTACGCTCTTGAAATGCTTTACCGGGTTAATGTCGGAAATGATTATTATTCTGCTGACGCTATAAATGTTTTTGGGACATGGAGTTATGATTTAAGCTATATAGCTGGCTTTAAACACGGAAGTGTCCTTGATATTAAGCTTCGAACAAGTAAAATGACTTACAACTCTTCCAAATACAATGACTATAATTATTCAGCACCAGCAGAACTTTATTGGACCGCCAGGACAATGGGTATCAACGAAGATAACACGAGGTACAACTTAACATGGTCATTCCCTGTTGATTCCGGTTTCAAGTACCTTATCAGGCTTCATTTCTGCGAGATATCCATGGAGATGACCCAGGTCAACCAAAGGGTGTTCAAGGTGTATATCAACAACCAAACAGCAGAGGAGAGCATGGACTTAGTTGCTCTGACTGGTGCTCCACTCGTCACCTTGTACAGAGACTACGTGGCTATGGTTCCTGTGGGAAATGGGAGGAAGCAAAATATGTGGATTGCCCTTCACCCCAACATGAAGTCAAAACCCAAGTATGCTGATGCCATACTGAATGGCATTGAGATCCTCAAGTTAAGCGACAGTAGCCACAATCTTGCAGCTAGTGTTCAACTGAAAATGGAACAAAAAGAGGAAAAAACTCGATACAGCATTATTATTGGAAGCACTGTTGGTGTCATCTTCGGATTGCTCATTACATTTTTCATTCTTGTTCGGAAATCAGGGAAGAGAATTAAGTGGGGACCTTTTCGGGAGGTGCCATCAAACTCAGCGGGCAAAAGTCCCAAAAATTTGCATGTAAGAGTCAGCTCAGGCCAGCGCTACCGATTCACATTAGCAGAGATCAGAACAGCCACGAACAACTTCAGCCAGGCTCTTGTCATTGGGGAGGGAGGCTTTGGCAAAGTTTACAAAGGATTGATCCGCGATGGAGGCACCAATGTGGCAATAAAGCGCTGTAATCCGACTTCCCACCAAGGATATAGAGAGTTTCAAAACGAGATCAATTTGTTATCCTCATTCTGTCACATGAATTTAGTGTCGTTGCTAGGCTACTGTCACGAGGGCAATGAGCTGATACTTGTCTATGAATACATGGCTGAAGGCACTCTTCGCGATCACTTATACAAAACAAAGAAACAGCCATTACCTTGGAATCAGAGAATAGAGATTTGTATTGCTGCAGCTCGAGGGTTACATTACCTCCATACAGGCACAAAGCACCCAGTTATTCACCGAGATGTCAAGTCATCCAACATATTGTTGGATCACAATCTCGTAGCTAAAATTGCAGATTTTGGGTTATCTAGAAGTGGCCCCACTTCCGCATCCCGCAGCCATGTTAGCACTGATGTAAAGGGTACATTTGGCTATTTAGACCCAGAATACTACAGGAGAAGAAAGCTAACTGAAAAATCTGACGTTTATTCATTTGGGGTGGTGCTGTTTGAAGTGTTCTGTGGAAGGCCAGCAGTGAATCCTATGGCAGTGGAAGAGGATGGCGAGAAGATTGGCTTGGTTGAGTGGGCTTGGCAGTGTCATCTCTCTGGGGAATTTCATAGAATGATGGACCCGCATTTAAAAGGAAGAGTTCCATCAGGTTGCCTCAAGGAGTTTGCAGATATTGGCATCAAGTGCTTGGCAGAAAAGAGCAAAGATAGGCCAACTATGGGGGAAGTGCTTAGTAGTTTGGAGAAGCTTCTGTTGTTGCAGGAGAGTTTGGACGGACAAGAAATAAATGGAGATGCACATTGCTGTATAGGGATAAATGAGAATATCGCAAGCAGTAGGTTAATTGATGAACAACACCTGCACGATGAAATTGTGCCAATGGATGGATGA 2517 0.4346 MKENHTLKLCKYVLSFVMHLSFLLTTLKTCSSTDIPSDRILLDCGSLKASQFNGAEWIGDTHNHFLPPAYDEISSARFISNLSSEVPEIPYSTARVIHSPFTYSFPFSHVLVFIRFYFLSTSYLGLSPSKAYFSVKTGPYTLLSHFSPSIAANDIKSGFFTKDFLVNVKAKRLDIIFIPESLVSNALAFVNGIEIFSVPLSIYFPGPHSPLPCVGHRVPFFINDDYALEMLYRVNVGNDYYSADAINVFGTWSYDLSYIAGFKHGSVLDIKLRTSKMTYNSSKYNDYNYSAPAELYWTARTMGINEDNTRYNLTWSFPVDSGFKYLIRLHFCEISMEMTQVNQRVFKVYINNQTAEESMDLVALTGAPLVTLYRDYVAMVPVGNGRKQNMWIALHPNMKSKPKYADAILNGIEILKLSDSSHNLAASVQLKMEQKEEKTRYSIIIGSTVGVIFGLLITFFILVRKSGKRIKWGPFREVPSNSAGKSPKNLHVRVSSGQRYRFTLAEIRTATNNFSQALVIGEGGFGKVYKGLIRDGGTNVAIKRCNPTSHQGYREFQNEINLLSSFCHMNLVSLLGYCHEGNELILVYEYMAEGTLRDHLYKTKKQPLPWNQRIEICIAAARGLHYLHTGTKHPVIHRDVKSSNILLDHNLVAKIADFGLSRSGPTSASRSHVSTDVKGTFGYLDPEYYRRRKLTEKSDVYSFGVVLFEVFCGRPAVNPMAVEEDGEKIGLVEWAWQCHLSGEFHRMMDPHLKGRVPSGCLKEFADIGIKCLAEKSKDRPTMGEVLSSLEKLLLLQESLDGQEINGDAHCCIGINENIASSRLIDEQHLHDEIVPMDG 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5553g00012 838 Gene3D Phosphorylase Kinase; domain 1 478 590 - -
Pral5553g00012 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pral5553g00012 838 FunFam Receptor-like protein kinase FERONIA 591 809 - -
Pral5553g00012 838 PANTHER OS03G0124300 PROTEIN-RELATED 15 471 IPR046957 GO:0004672
Pral5553g00012 838 SMART serkin_6 514 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5553g00012 838 Pfam Protein tyrosine and serine/threonine kinase 519 789 IPR001245 GO:0004672|GO:0006468
Pral5553g00012 838 Gene3D Transferase(Phosphotransferase) domain 1 591 807 - -
Pral5553g00012 838 FunFam FERONIA receptor-like kinase 226 418 - -
Pral5553g00012 838 FunFam FERONIA receptor-like kinase 39 199 - -
Pral5553g00012 838 FunFam receptor-like protein kinase FERONIA 479 590 - -
Pral5553g00012 838 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Pral5553g00012 838 CDD STKc_IRAK 520 785 - -
Pral5553g00012 838 ProSiteProfiles Protein kinase domain profile. 514 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5553g00012 838 Pfam Malectin-like domain 42 416 IPR024788 -
Pral5553g00012 838 Gene3D - 40 198 - -
Pral5553g00012 838 Gene3D - 226 418 - -
Pral5553g00012 838 SUPERFAMILY Protein kinase-like (PK-like) 499 787 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5553g00012 Pral-Chr5553 110279 112795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5553g00012 36 816 Receptor kinase-like Gene Family AT3G51550 44.311 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral5553g00012 Malectin_like 5.7e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5553g00012 - - gmx:100776324 972.23