LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5553g00011	ATGAATACTTCATCTTTTTCTCTTTTCATCTCTCTGTTTCTCCATCTTTTACTCTTGCCTCTCCACATTGCTTCAGCTGATAATGCCAGTTATCTTCCCTTGGAAAACATTGCCCTCAACTGTGGCACTAGCTCATCAGAGCAAGTGTCCTATAATGGGAGGAACTGGACTGGTGATGCGGGTTCAGAGTACGTATCCTCTAATGCAGAAGCCAAGTCCCTGATGGCCAAAGCCTCTCTGATTAATGAATCTGTTCCTGATGTTCCATATATGACTGCCCGAGTATTTTACTCTCACTTTACCTACAGGTTCAACGTGACTCCAGGTCCAAAATTTGTCCGCCTCCACTTCTACCCAACTTCTTTCTTGGGTCTGGATGTCTCCAGAGCTTTTGTATCAGTCACAGCTGGTAATTTCACTCTTCTGCGTAACTTGAGTGTTTCTCTCACAACTGATTACATCAACAAACCATATCTGATGAAAGAGTTCATCATCCATGTGAGTGGAAGAACCTTGGAACTGACTTTCACTCCATCATCCAGTGCTTCGGATGTCTATGCGTTCGTCAGTGGAATCGAAGTTGTTTCCATGCCATCCAATCTCTATATTCGGGGTGATAATGCCCATATTCCTTTAGTTGGTCATTATCCTGTGCTATATTACATTCATAATGATTCTGCCTTGGAAACCGTATACAGAATCAATGCAGGAGGGGATGAGATTCCAGCCAAATATGATACGGGGATGTTTCGCACTTGGACCAGAGATAATGACTACTCATTTTTACCTATAGCCAGTGAAGAACCCAATGACATGGCCTCGCCAATTCTGTATCCAGAAACTACTCCAGCATATGTTGCACCAGAACTTGTCTATCGCACAGCCCGGGCAATGACGCCCTTTTCAGATGAACGTCTTAATTTAAATTATAATCTGTCCTGGTTCTTCCCGATTGATTCTGGTTTCAATTATCTCATTAGGCTCCACTTCTGTGATATTTACCGAGACATAACTTTGGTGAAGCAGATAGCTTTTATTATATATTTAAATAATCAAACAGCTGAGCATCGATTCGATGTAATTGCTGTGAGTGGTGGTCCTAGAATTCCTGTGTACCGAGACTTTGTAGTGAAGGTTCCTGAAACTAGCGAGGGAAAGCAGGATATTTGGATAGACCTTTATCCAGATGTGCAGAGCAAAGCTCAGCACTATAATGCTTTCTTGAATGGTGTAGAGATCTTCAAACTTAGCAATTGGGATGGAAATCTTGCAGGAGTCAACCCTACCAGTAGCAAGTCTGAGTCAGTTGTGCCAGTGCCCCATGTTGCAGTGTCAAAAAAGCCGAAGAGATTGGTATTCATCATCATTGGATGTGGACTAAGTGTTGGGGCACTAGGAGTATCGATTCTCCTTTTCCTGATTGTTTACGTGTTGAAACCAGTTGAGCCAAGGAAGATTTCATGGCGTAAGCTACTGATCTTTATTCCTAATCAAGTTAGAAAACCTCAGAAGTCATCTTTTCGCCGTCATTTCTCCATGGATGAGATAAGAGAGGCGACAAATAACTTTGATGAGGCTCTGGTCATTGGCATCGGCGGGTTTGGCAAAGTTTACAAGGCTAGTTTTGATCAAGGGTCTACCTTTGTAGCCATAAAGCGGAGCAATCCAATGTCAGAACAAGGTGCTTTAGAATTTGAGACAGAGATCCATGTGCTCTCCCAGCTGCGCCACCACAACCTTGTTTCTCTTTTGGGTCATTGCCAAGACGAGGGAGAGATGATACTGGCATATGAATATATGTCCAATGGTACTCTGTTTGATCATCTTCATTTGAGATCGTCGAGGGAAGAACTACCTTTGTCATGGGTTCAACGTCTTGAGATATGCATCGGAGTTGCAAGGGGTTTACACTACCTCCACACTGGCACAGAGCACAAGATCATCCACCGCGACATCAAGACAACCAACATACTCCTAGACCATAATTGGGTGGCCAAAATTTCAGACTTTGGTTTGTCAAAGGCAAGCAACCGAGCCTTAGTCAGCACCAACGTCAAGGGCAGTGTTGGATACTTAGATCCAGAGTACTTTCGGCATCACAAGTTGAGCGAGCAATCGGATGTGTACTCATTTGGGGTGGTGTTGTTGGAGGTGATAAGTGCTAGGCCTGCTGTTAGTCCAGTTGAAGATGATGAACATAGTAACTTGGCAGATTGGGCTCTGTATTGCTGTGAGAATGGCATTGAAACTCAATTAGTGGATCCTGACCTTGAAGGTAAGATAGCAGCAGAATCTTTTGAGACATATATTGGGGTCGCCAGGAAATGCTTGGCTGAGAAAGGGGTAGAGCGCCCCACCATGAGTGATGTGTTGCAGAGCCTTGTCCTGGCACTGCAGCTTCAGAGAAAGGGTAATATGGTACCAACCAGGGATCGCAACAGAACAGAAAATAGCCATTCACAGGGCAACTCAGATTTGACACCTGGGATTGAGTTCTCCGAGATCATGATACCCATTGGAAGATGA	2526	0.4406	MNTSSFSLFISLFLHLLLLPLHIASADNASYLPLENIALNCGTSSSEQVSYNGRNWTGDAGSEYVSSNAEAKSLMAKASLINESVPDVPYMTARVFYSHFTYRFNVTPGPKFVRLHFYPTSFLGLDVSRAFVSVTAGNFTLLRNLSVSLTTDYINKPYLMKEFIIHVSGRTLELTFTPSSSASDVYAFVSGIEVVSMPSNLYIRGDNAHIPLVGHYPVLYYIHNDSALETVYRINAGGDEIPAKYDTGMFRTWTRDNDYSFLPIASEEPNDMASPILYPETTPAYVAPELVYRTARAMTPFSDERLNLNYNLSWFFPIDSGFNYLIRLHFCDIYRDITLVKQIAFIIYLNNQTAEHRFDVIAVSGGPRIPVYRDFVVKVPETSEGKQDIWIDLYPDVQSKAQHYNAFLNGVEIFKLSNWDGNLAGVNPTSSKSESVVPVPHVAVSKKPKRLVFIIIGCGLSVGALGVSILLFLIVYVLKPVEPRKISWRKLLIFIPNQVRKPQKSSFRRHFSMDEIREATNNFDEALVIGIGGFGKVYKASFDQGSTFVAIKRSNPMSEQGALEFETEIHVLSQLRHHNLVSLLGHCQDEGEMILAYEYMSNGTLFDHLHLRSSREELPLSWVQRLEICIGVARGLHYLHTGTEHKIIHRDIKTTNILLDHNWVAKISDFGLSKASNRALVSTNVKGSVGYLDPEYFRHHKLSEQSDVYSFGVVLLEVISARPAVSPVEDDEHSNLADWALYCCENGIETQLVDPDLEGKIAAESFETYIGVARKCLAEKGVERPTMSDVLQSLVLALQLQRKGNMVPTRDRNRTENSHSQGNSDLTPGIEFSEIMIPIGR	841

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5553g00011	841	SUPERFAMILY	Protein kinase-like (PK-like)	506	796	IPR011009	-
	Pral5553g00011	841	ProSiteProfiles	Protein kinase domain profile.	523	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5553g00011	841	FunFam	FERONIA receptor-like kinase	36	198	-	-
	Pral5553g00011	841	FunFam	receptor-like protein kinase FERONIA	495	599	-	-
	Pral5553g00011	841	FunFam	FERONIA receptor-like kinase	226	417	-	-
	Pral5553g00011	841	PANTHER	OS03G0124300 PROTEIN-RELATED	9	477	IPR046957	GO:0004672
	Pral5553g00011	841	ProSitePatterns	Protein kinases ATP-binding region signature.	529	552	IPR017441	GO:0005524
	Pral5553g00011	841	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	647	659	IPR008271	GO:0004672\|GO:0006468
	Pral5553g00011	841	Pfam	Protein kinase domain	528	793	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5553g00011	841	FunFam	Receptor-like protein kinase FERONIA	600	817	-	-
	Pral5553g00011	841	Pfam	Malectin-like domain	39	415	IPR024788	-
	Pral5553g00011	841	MobiDBLite	consensus disorder prediction	805	828	-	-
	Pral5553g00011	841	Gene3D	Transferase(Phosphotransferase) domain 1	600	819	-	-
	Pral5553g00011	841	Gene3D	-	226	417	-	-
	Pral5553g00011	841	Gene3D	-	36	198	-	-
	Pral5553g00011	841	Gene3D	Phosphorylase Kinase; domain 1	508	599	-	-
	Pral5553g00011	841	CDD	STKc_IRAK	529	794	-	-
	Pral5553g00011	841	SMART	serkin_6	523	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5553g00011	Pral-Chr5553	105339	107864	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5553g00011	29	841	Receptor kinase-like Gene Family	AT3G51550	45.516	0.0	706

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pral5553g00011		Malectin_like	8.2e-36	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5553g00011	-		-	gmx:100776859	1022.31