Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5553g00010 ATGAAGAAAAACCACACTGCAAAGTTATGCAAGTACGTTGTGAGCTTTGTGGTGCGTCTTTCCCTCCTTTTAACTACTTTGAAAACCTGTTCTTCAACCGACATCCCTTCAGACAGAATCCTCCTCGACTGTGGTTCTTTGGAAACATCACAATTCAATGGAGCAAAATGGACTGGGGACACTCACAATCATTTTTTGCCTCTAGCGTATAGCGAAACATCTTCCGCACGCTTCATCTCAAACCTGAGCTCTAGAGTACCAGAGATCCCATACTCAACGGCTCGCGTGATTCATTATCCATTCACGTACTCTTTTCCCTTCTCTCATGCCCTTGTGTTCATCCGCTTTTACTTTCTTTCGACTTCATACCTGGGACTAAGCCCCTCTAAGGCTTACTTTTCCGTTAAAACGGGTCCTTATACTCTGCTGAGTCATTTCAGCCCATCTGTTGCTGCTGACGAGCTCAAATCAGTCTTCTTCACCAAGGATTTCTTGGTCAACGTCAAGGAAAAGAGACTTGACATAACTTTCATCCCAGAATCTCTAGCTTCCAATGCACTTGCCTTCATAAATGGCATCGAGATCTTCTCAGTGCCTCTTAATATTTACTCTACAGGTTCCCACATTCCCCTTCCTTTTCCTGGGCATCAGGCACCTTTCTTCATTAATGATGACTACGCTATTGAAATGCTTTACCGGGTTAATGTCGGGAATGATGATTATTCAGTTGATGCCATAAATGCCTTTGGGACATGGGGCAATGATTTAAGCTACATAGCAGGCTTTAAACACGGAAGTGTGCTTAATATTAAGCTTCGTCCAGCTACGGTGACTTATCACTCTTCCAAATCCAATGACTATTATTACGCAGCACCAATAGAACTTTACTGGACCGCCAGGACAATGGGTATCAGCGGAGATAACACGAGGTACAACTTAACATGGTCATTCCCTGTTGATTCCGGTTTCAAATACCTTATTAGGCTTCATTTCTGCGAGATATCCATGGAGATAACCCAAGTCAACCAAAGGGTGTTCAAGGTGTATATCAACAACCAAGTAGCAGAGGAGAGCATGGACTTAGTTGCTCTGACTGGTGCACCACTTGTCACCTTATACAGAGACTACGTGGTTATGGTTCCTATGGAAAATGGGAAGAAGCAAAATATGTCAATTGCCCTTCACCCCAACATGAAGTCAAAACCCAAGTATGCTGATGCTATACTGAACGGCATTGAGATCCTCAAGTTAAGCGACAGTAGCAAGAATCTTGCAGCCAGCATTCAACTGAAAATGGAACAAAAAGAGAAGAAATCTCGACACAGCATTATTATTGGAAGCACCGTTGGTGTCATCTTGGGGTTGCTCATTACATTTTTAATCCTTATTCGCAAAACTGGGGCGAGAGTTAAGTGGGGACCTTTTCGGGTGGTCCCTTCAAACTTAGCAGGCAAAAGTCCCAAAAATTTGCATGCAACAGTCAGCTCAGGTCAATGCTACCGATTCACATTAGCAGAGATCAGAACAGCCACGAACAACTTCAGCGAGGCTCTTGTCATTGGGGAGGGCGGCTTTGGCAAAGTTTACAAAGGGTTGATCCACGATGGAGTCACCAATGTGGCAATAAAGCGCCGTAATCCGACTTCCCACCAAGGATATAGAGAGTTTCAAAACGAGATCAATTTGTTGTCCTCATTCTGTCACATGAATTTAGTGTCGTTGCTAGGATATTGTCAAGAGGGCAATGAGCTGATACTTGTCTATGAATACATGGCTGAAGGCACTCTTCGTGATCACTTGTACAAAACAAAGAAACAGCCATTGCCTTGGAATCAGAGAATAGAGATTTGTATTGCTGCAGCTCGAGGGCTACATTACATTCATACAGGCACACAGCACCCAGTTATTCACCGTGATGTCAAGTCAGCCAACATATTGTTGGATCACAATCTGGTAGCTAAAATTGCCGATTTTGGGTTATCTAGAATTGGCCCCACCTCCGCATCCCGCAGCCATGTTAGCACTAATGTAAAGGGTACATTTGGCTATTTAGACCCAGAATACTACAGGAGAAGAAAGCTAACTGAAAAATCTGACGTTTATTCATTTGGGGTGGTGCTGTTTGAAGTGTTCTGCGGAAGGCCAGCAGTGAATCCTCTGGCAGTGGAAGAGGATGGCGAGAAGATTGGCTTGGTTGAGTGGGCTTGGCAGTGTCATCTCTCTGGGGAATTTCATAGAATGATGGACCCGCATTTAAAAGGAAGAGTTCCATCAGGTTGCCTCAAGGAATTTGTAGACATTGGCATCAAGTGCTTGGCAGAAAAGAGCAAAGATAGGCCAACTATGGGGGAAGTGCTTAGTAGTTTGGAGAAGGTTCTGTTGTTGCAGGAGAGTTTGGACGGACAAGAAATAAATGGAGATGCACATTTCCATATAGGGACAAATGAGGATACCGCAAGCAATAGGTTAGTTGATGAACAACACTTGCACAACGAAATCGTGCCAATGGATTGA 2514 0.4395 MKKNHTAKLCKYVVSFVVRLSLLLTTLKTCSSTDIPSDRILLDCGSLETSQFNGAKWTGDTHNHFLPLAYSETSSARFISNLSSRVPEIPYSTARVIHYPFTYSFPFSHALVFIRFYFLSTSYLGLSPSKAYFSVKTGPYTLLSHFSPSVAADELKSVFFTKDFLVNVKEKRLDITFIPESLASNALAFINGIEIFSVPLNIYSTGSHIPLPFPGHQAPFFINDDYAIEMLYRVNVGNDDYSVDAINAFGTWGNDLSYIAGFKHGSVLNIKLRPATVTYHSSKSNDYYYAAPIELYWTARTMGISGDNTRYNLTWSFPVDSGFKYLIRLHFCEISMEITQVNQRVFKVYINNQVAEESMDLVALTGAPLVTLYRDYVVMVPMENGKKQNMSIALHPNMKSKPKYADAILNGIEILKLSDSSKNLAASIQLKMEQKEKKSRHSIIIGSTVGVILGLLITFLILIRKTGARVKWGPFRVVPSNLAGKSPKNLHATVSSGQCYRFTLAEIRTATNNFSEALVIGEGGFGKVYKGLIHDGVTNVAIKRRNPTSHQGYREFQNEINLLSSFCHMNLVSLLGYCQEGNELILVYEYMAEGTLRDHLYKTKKQPLPWNQRIEICIAAARGLHYIHTGTQHPVIHRDVKSANILLDHNLVAKIADFGLSRIGPTSASRSHVSTNVKGTFGYLDPEYYRRRKLTEKSDVYSFGVVLFEVFCGRPAVNPLAVEEDGEKIGLVEWAWQCHLSGEFHRMMDPHLKGRVPSGCLKEFVDIGIKCLAEKSKDRPTMGEVLSSLEKVLLLQESLDGQEINGDAHFHIGTNEDTASNRLVDEQHLHNEIVPMD 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5553g00010 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pral5553g00010 837 Pfam Malectin-like domain 42 416 IPR024788 -
Pral5553g00010 837 CDD STKc_IRAK 520 791 - -
Pral5553g00010 837 Pfam Protein tyrosine and serine/threonine kinase 519 789 IPR001245 GO:0004672|GO:0006468
Pral5553g00010 837 ProSiteProfiles Protein kinase domain profile. 514 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5553g00010 837 Gene3D Phosphorylase Kinase; domain 1 480 590 - -
Pral5553g00010 837 SUPERFAMILY Protein kinase-like (PK-like) 489 790 IPR011009 -
Pral5553g00010 837 Gene3D - 40 199 - -
Pral5553g00010 837 Gene3D - 226 418 - -
Pral5553g00010 837 SMART serkin_6 514 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5553g00010 837 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Pral5553g00010 837 PANTHER OS03G0124300 PROTEIN-RELATED 18 469 IPR046957 GO:0004672
Pral5553g00010 837 FunFam receptor-like protein kinase FERONIA 480 590 - -
Pral5553g00010 837 FunFam Receptor-like protein kinase FERONIA 591 809 - -
Pral5553g00010 837 Gene3D Transferase(Phosphotransferase) domain 1 591 808 - -
Pral5553g00010 837 FunFam FERONIA receptor-like kinase 226 418 - -
Pral5553g00010 837 FunFam FERONIA receptor-like kinase 39 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5553g00010 Pral-Chr5553 94227 96740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5553g00010 36 807 Receptor kinase-like Gene Family AT3G51550 45.050 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral5553g00010 Malectin_like 1.3e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5553g00010 - - gmx:100776324 961.829