Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5552g00010 ATGGGAACTATTTGCCAAGAAGTTCCTCCTTTGCCTCAGGATCTGAAGGTGAGGATCCAAAACTCGTGCATGGTTTTTCCATCCAAACAAACGGAGAGAAGGTCCATGTTCTTGTCAAACATAGACAAGGTCCTCAATTTCGACGTTGAAACTGTTCACTTCTTCGCATCCCAGGAGGATTTCCCTCCGGACATTGTAGCTGAGAGGCTGAAGAGGGCGTTGGCCGATGCTTTGGTGCCTTATGACTTCTTCGCCGGAAGACTGAAGCTCAACTCTGAAACCGGTCGGTTGGAGATAGACTGCAACGGTGCGGGAGCTGGGTTTGTGGTGGCTTCCAGTGACTTGGAGTTGGATCAGATAGGAGACTTGGTCTACCCTAATCCAGCTTTTGCTCAGTTAGTTCATAAGAATAAGGATTTTCTCAAACCGGGTGATCAGCCACTGTGTGTTTTCCAGCTGACGTCCTTCAACTGTGGCGGCTTTGCGATTGGGATCTCAACCAGCCACACCACTGTCGACGGCATTAGCTTCAAGATCTTCTTGGACAACCTTGCCGCTTTCGCCGCCAACAAGCCCTTGGCCGTGACCCCTTCCCACGACAGGCATCTCCTGGCCGCTCGATCCCCGCCACGTGTTCCCTTCAGCCACCCCGAGCTCCTCAATCTCGGTAACCTCCCCGTCACGGGCCCCGAGTCTGGAGTATTCGAAGCCTCCTCTGAGCACCTCGATTTCAAGATCTTCCGTTTAACCGCCCACAACATCAACCACCTCAAAGCCGAGGCCAAGGCCAATGCCACTGGAGCCGCCCGCATCACCGGCTTCAACGTCGTCACCGCTCTCGTGTGGAGGTGCAAGGCGTTATCCGCGGGAGATGATCCGAATCGGTCGTCGACTATGCTGTATGCTGTGGATATTAGGTCGCGACTGAATCCTCCGCTGCCGAAGGCCTACGCCGGAAACGCGGTATTGACTGCGTATGCGACGGCCAAGTGTGAGGAGTTGAAGCGAGGTCCCTTTGGTCGGTTGGTGGAGACGGTGAGTGAAGGCGCGGTGAGAATGACGGATGAGTACGCGAGATCGGTGATAGACTGGGGGGAGCTGTACCATGGTTTTCCGAACGGTGAGGTGCTGGTGTCGTCGTGGTGGAGGCTAGGGTTTGCAGAGGTGGAGTATCCATGGGGAAAGCCTAGGTATAGTTGTCCAGTGGTGTATCACAGGAAGGATATTATCCTCTTTTTCCCCCCAGATGATGAGGCTGAAGGCGGCGGTGGCGTTAATGTTTTGGTGGCACTTCCTCCCAAGGAAATGCAGAAATTCCTCAAACTCTTCCATGAGTTCTTGAATTGA 1347 0.5382 MGTICQEVPPLPQDLKVRIQNSCMVFPSKQTERRSMFLSNIDKVLNFDVETVHFFASQEDFPPDIVAERLKRALADALVPYDFFAGRLKLNSETGRLEIDCNGAGAGFVVASSDLELDQIGDLVYPNPAFAQLVHKNKDFLKPGDQPLCVFQLTSFNCGGFAIGISTSHTTVDGISFKIFLDNLAAFAANKPLAVTPSHDRHLLAARSPPRVPFSHPELLNLGNLPVTGPESGVFEASSEHLDFKIFRLTAHNINHLKAEAKANATGAARITGFNVVTALVWRCKALSAGDDPNRSSTMLYAVDIRSRLNPPLPKAYAGNAVLTAYATAKCEELKRGPFGRLVETVSEGAVRMTDEYARSVIDWGELYHGFPNGEVLVSSWWRLGFAEVEYPWGKPRYSCPVVYHRKDIILFFPPDDEAEGGGGVNVLVALPPKEMQKFLKLFHEFLN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5552g00010 448 Gene3D - 233 446 IPR023213 -
Pral5552g00010 448 Gene3D - 13 220 IPR023213 -
Pral5552g00010 448 Pfam Transferase family 15 441 - -
Pral5552g00010 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5552g00010 Pral-Chr5552 61418 64537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5552g00010 15 446 Monolignol Biosynthesis Gene Families AT5G48930 31.849 3.05e-58 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5552g00010 K13065 - gmx:100305576 644.425