Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5552g00003 ATGGAGTCACAAGTGTTAACTGCGTTAATGCTAATAATATGCTTAGTTCCTTGCTGCTCTTCCCAGATGCAACCGATGCTGCTGCATCGTAAATCTCCGAAACCCACAACCTCCTACGCTGTCATCTTCGACGCCGGTAGTACTGGTAGCCGTGTCCATGTCTTCCACTTCAACCAGATCCTAGACCTCCTTCCCATCGGCCAAGATCTTGAGTTTCTCGACAAGGTTAAACCGGGTTTGAGTGCATATGCTGAGAACCCAGAAAAAGCTGCTGAATCTCTCATTCCACTTTTAGAGGAAGCCGAGAGTGTTGTTCCCAAGAGGGTGCACCACAAGACTCCCCTCAAACTTGGGGCAACCGCAGGTTTGAGACTTCTGAAAGGAAATGCTTCTGAATTGATCTTGCAGGCGGTCAGGGATATGTTCAAGGAAAGAGGCACTTTAAAACTCGAGCCTGATGCTGTTGCTGTTATTGGTGGAACCCAGGAAGGCTCTTATCTATGGGTGGCAATAAACTATCTACTGGGAAACTTAGCAAAAGAATATGGGGAGACAGTGGGAGTGGTTGATCTGGGAGGAGGGTCAGTTCAAATGGCATATGCCATCTCAGAGGAAAATGCTGCCAAGGCTCCCAACGCTCAACAAGGAGACGACCCTTACGTAACCCGGATGTACCTTAAGGGAACCAAGTATTCCGTCTATGTTCACAGTTACTTGCACTACGGGAAAGAAGCATCTCGTGCAGAGATCTTGAAGGTGACCCGTGGTTCTAACAACCCTTGTATTTTAGCTGGTTTTAATGGGTCTTATGTATACGGAGGAGTGGAATACCAGGCGTCAGCCATGCCTGGCGGGTCGAGCTTCAGTGAATGCAGAAACACAGTTCTGAAGGCTCTCAATGTGAACGCCACATGCCCAAACGAGAACTGCACATTTGGTGGCATCTGGAACGGTGGAGGAGGACCTGGCCAGAAAAACCTCTACCTCGCCACTTCTTTCTATTACTTGGCTACTGAGTCTGGCATTGCCGATATAAAGAAGCCCAGCGACAAAGTTCGAATCGTGGATTATAAGATTGCGGCCGAGCTTGCTTGCAAGACAGCATTAGAGGAAGCCAAATCCACCTTCCCACTGATGAAGGACAATGGGCTTCAATATGCGTGCCTGGATCTTGTATACCAGTACACCTTGCTGGTTGATGGGTTTGGGCTGGATCCATGGCAAGAAGTGACGGTGGTGAAGCAAGTGAAGTATAAAGATCATCTGGTAGAAGCAACCTGGCCACTGGGCACCGCCATTGAAGCCGTATCATCTTTACCCAAATTTGATCGGCTCTTGTACTTTGTTTGA 1350 0.4837 MESQVLTALMLIICLVPCCSSQMQPMLLHRKSPKPTTSYAVIFDAGSTGSRVHVFHFNQILDLLPIGQDLEFLDKVKPGLSAYAENPEKAAESLIPLLEEAESVVPKRVHHKTPLKLGATAGLRLLKGNASELILQAVRDMFKERGTLKLEPDAVAVIGGTQEGSYLWVAINYLLGNLAKEYGETVGVVDLGGGSVQMAYAISEENAAKAPNAQQGDDPYVTRMYLKGTKYSVYVHSYLHYGKEASRAEILKVTRGSNNPCILAGFNGSYVYGGVEYQASAMPGGSSFSECRNTVLKALNVNATCPNENCTFGGIWNGGGGPGQKNLYLATSFYYLATESGIADIKKPSDKVRIVDYKIAAELACKTALEEAKSTFPLMKDNGLQYACLDLVYQYTLLVDGFGLDPWQEVTVVKQVKYKDHLVEATWPLGTAIEAVSSLPKFDRLLYFV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5552g00003 449 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 9 439 IPR000407 GO:0016787
Pral5552g00003 449 CDD NBD_sugar-kinase_HSP70_actin 41 200 - -
Pral5552g00003 449 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 158 173 IPR000407 GO:0016787
Pral5552g00003 449 Gene3D - 39 433 - -
Pral5552g00003 449 Pfam GDA1/CD39 (nucleoside phosphatase) family 37 440 IPR000407 GO:0016787
Pral5552g00003 449 FunFam Apyrase 1 159 417 - -
Pral5552g00003 449 Gene3D Exopolyphosphatase. Domain 2 159 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5552g00003 Pral-Chr5552 28848 34340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5552g00003 38 438 Calmodulin-binding Proteins AT3G04080 59.204 1.03e-160 460