Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5552g00002 ATGGAATGGCGAGTAGGAGCAGCGTGGATATGGTGCCTGTTGGTGGTGTGGACAGCGCCGTCGTGCCACTGCCATGTGCATCGGAAATTGGGGGCTCTCCGTCAGGGATCCAGCGGCGTGAGTAGCAGCTCCTCCAGCAACTCGTCATACGCCGTCATACTGGACGGTGGCAGCACGGGGACTCGCATTCATGTGTTCCACTTCGACCAGAGCTTGCAGCTGCTTTACATCGGCGACGGTTTAGAGTACTACTACAAGGTGACGCCGGGGTTGAGTTCGTACGCAGATAATCCGGAGGAGGCGGGGGAGTCGTTGCTGCCGTTGCTGAGGAAAGCGGAGAATGTTATTCCGGAGGAGTCTCGCTCCGCCACGCCGCTCAGGCTTGGGGCTACTGCGGGTTTGAGATCTCTGGGCTCCCATACTGCCGAGCTCATCTTGCAGGCCGTTAGGGATGTCGTGAGGAGCAATAGCTCGTTTGCGGTGGAGTCTGATGATGCGATTGCCGTTCTTAGTGGAAACCAAGAGGGATATTATCTATGGGTGACGGTGAACTATCTACTGAATAAGCTGGGAGAAGGGTATGCAGAGACAATAGGAGTGGCAGATCTGGGAGGCGGATCTGTTCAAATGGCTTATGCCATCTCAGAGGATGTTGCTGCTAATGCTCCTCAGAATGCACCTAACGGTGACGCTTACGTTACTAAGATTTCCCTCGCTGGTTCCACCTACCACATTTACGTTCACAGTTACTTGAACTTTGGCAAAGAAGCATCCCGTGCGCAGATCTTAAAGCTCACCGGTGATTCTGACAACCCTTGCATTTTAACTGGCTTCAGTGGGACCTACGAGTACGAAAACGTGAAGTACAAAGCGTCGGCGCCGGCGAACGGGTCAAGCTACAGTGAATGCAGGAACACAGTGCTGAAGCTTTTTGATTTCACCACATGTGCGCATAAGAACTGCACATTTGGGGGGGTTTGGAACGGTGGAGGAGGACCGGGCCAGAAAAATCTCTACCTTGCCACTTCTTTCTATTACCTAGCCATCGACGCGGGTTTTGCTGACCCAAACAAAACGAGCGGCCAGGTTCGTCTGATAGATTATAAGATAACGGCGGAGCTTGCCTGTAAGACAACATACGAGGAGGCCAAAACCACCTTCCCGCATAATGCCGAAGACGTGCTTGCATATACCTGCATGGATCTCGTATACCAGTACACCCTGCTGGTCGATGGATTTGGGTTGGATCCATGGGAGGTGGTGACGGTTGCGAAGGAGATAGAGTACAAGGGCTCCTCCTTGGATGCATCGTGGGCCCTAGGCAGCGCCATCGAGTCTATTTCTTCTGTATCTGAATTCCAACACTAA 1368 0.5292 MEWRVGAAWIWCLLVVWTAPSCHCHVHRKLGALRQGSSGVSSSSSSNSSYAVILDGGSTGTRIHVFHFDQSLQLLYIGDGLEYYYKVTPGLSSYADNPEEAGESLLPLLRKAENVIPEESRSATPLRLGATAGLRSLGSHTAELILQAVRDVVRSNSSFAVESDDAIAVLSGNQEGYYLWVTVNYLLNKLGEGYAETIGVADLGGGSVQMAYAISEDVAANAPQNAPNGDAYVTKISLAGSTYHIYVHSYLNFGKEASRAQILKLTGDSDNPCILTGFSGTYEYENVKYKASAPANGSSYSECRNTVLKLFDFTTCAHKNCTFGGVWNGGGGPGQKNLYLATSFYYLAIDAGFADPNKTSGQVRLIDYKITAELACKTTYEEAKTTFPHNAEDVLAYTCMDLVYQYTLLVDGFGLDPWEVVTVAKEIEYKGSSLDASWALGSAIESISSVSEFQH 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5552g00002 455 Gene3D - 50 444 - -
Pral5552g00002 455 Gene3D Exopolyphosphatase. Domain 2 171 428 - -
Pral5552g00002 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 44 449 IPR000407 GO:0016787
Pral5552g00002 455 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 170 185 IPR000407 GO:0016787
Pral5552g00002 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 450 IPR000407 GO:0016787
Pral5552g00002 455 FunFam Apyrase 1 171 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5552g00002 Pral-Chr5552 19578 24027 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5552g00002 42 449 Calmodulin-binding Proteins AT3G04080 50.244 2.47e-139 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5552g00002 K14641 - gmx:100784833 484.567