Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5551g00001 ATGGAGCATCTTGGAAATCAAGCACGACGCAGGCACCCTATGTCTTCCGATTTAGATGAGTGCCGGGAACACCTGCTAGTGGTAGATGTGAATGGTCAGACTCAGATTGACAAGCCTCCCAAATTTCGGATTCGAAATCTCACCAAAGTCTCCGATGCCGGAGTTCCGATTCTCAAGGGCGTTGACTTGGACGTTCCCAAGGGCGTGATACTCGGCGTCGTTGGACCCAGTGGTAGCGGCAAATCGACGCTTCTCAGGGCCTTCAACCGTCTCTGGGAGCCTCCCTCCGGCACCGTCTTCCTCGATAATAACGATATCTGCGATCTCGATGTTCTGTCCCTCCGCCGTAATGTCGGCATGCTCTTTCAGCTCCCTGCCCTCTTCGAAGGCACAGTGGCAGACAATGTGAGGTATGGACCACAACTAAGAGGGAAAAAGCTAACTGATGAAGAAGTACGCAGGTTGCTGATAACAGCAGACCTTGATGCTTCTTTGATGAGCAAGAATGGCTCTGAACTCTCTGTGGGTCAAGCTCAACGAGTTGCACTTGCCAGGACTTTAGCTAATTCCCCTGAGGTTTTACTGCTGGATGAGCCAACCAGTGCACTAGATCCAATATCAACAGAGAACATAGAAGGTGCCCTAATGAAGCTGAACAAGAACAGTGGTATGACAGTGATAATTGTCTCTCACAGCATCAAACAGATACAGAGGATAGCTGACTTGGTGTGCCTAGTTGTTGATGGTCAAATAGTTGAAGTTTTAAAGCCTGATCTACTGTCACAAGCCACGCATCCCATGGCCCAAAGGTTTCTTCAACTTAGTTCTTAG 831 0.491 MEHLGNQARRRHPMSSDLDECREHLLVVDVNGQTQIDKPPKFRIRNLTKVSDAGVPILKGVDLDVPKGVILGVVGPSGSGKSTLLRAFNRLWEPPSGTVFLDNNDICDLDVLSLRRNVGMLFQLPALFEGTVADNVRYGPQLRGKKLTDEEVRRLLITADLDASLMSKNGSELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEGALMKLNKNSGMTVIIVSHSIKQIQRIADLVCLVVDGQIVEVLKPDLLSQATHPMAQRFLQLSS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5551g00001 276 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Pral5551g00001 276 FunFam ABC transporter, ATP-binding protein 39 271 - -
Pral5551g00001 276 CDD ABC_PstB_phosphate_transporter 42 260 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pral5551g00001 276 Gene3D - 37 275 IPR027417 -
Pral5551g00001 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 261 IPR027417 -
Pral5551g00001 276 Pfam ABC transporter 58 201 IPR003439 GO:0005524
Pral5551g00001 276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 273 IPR003439 GO:0005524
Pral5551g00001 276 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 14 275 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pral5551g00001 276 SMART AAA_5 67 258 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5551g00001 Pral-Chr5551 1302 4193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5551g00001 55 274 Calmodulin-binding Proteins AT2G36910 33.772 1.56e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5551g00001 K02068 - qsa:O6P43_007813 406.757