Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5548g00062 ATGGAGAATGTTGATTCAAAGAGCGGTTTCTGTTCGGATTCTAGAACCTTCCACAGCCTCAGACCTCCCGTTCATCTTCCTCCTCCTCACTCTCCCCTCTCTGCTTCACAGTACGCTCTCTCTCTCCGTCTCAAATCGCCCTGGCCCGACTCAGTTCCCGCCCTTATCGACGCGGCCTCCAGCCACCGAGTTTCCTTCTCCGAGTTCATCCATTTCTCACAAACCTTAGCTTCTAATCTACAATCTGTTGTTGGCCTCTCCAAAGGCGACACAGCCTTTGTACTATCCCCCAACCTCATTAAGGTTCCGATCCTCTACTTCGCCCTGCTTTCCCTTGGGGTTGTCGTCTCTCCGGCTAACCCAATCAGCACACGCGCCGAGATTTCCCACCTGTTCCAGCTATCGTCGCCGGTCATTGCCTTCACAACGTCGTCCACAGCACAAAACCTTCCGCACAGCCTACGCCTCGGAGTCATCCTTCTCGACTCACCTGAGTTCGACTCGCTGATGACGACGGCAAGAAGCCTCACGAAACCAGTGGTCCCGCGCGTGGAGGTGAGCCAATCAGATATAGCCGCGATTTTGTACTCTTCGGGGACCACGGGGAAGGTGAAGGGAGTAATGCTGAGTCACCGGAATCTGATAGCATTAGCGGCGAGTTACGACGCGAGTCGTCCTCAGAGAGAAAGGCCGGCGGTTTTCCTCTACACGATACCGTATTTTCACGTGTACGGTTTCACCTACTGTCTCAGGTCGGTTGTGCTATCAGAGACGGTGGTGCTGATGGAGAGGTTCAGAATGGAGAAGATGTTGCGGGCGGTGGATGAGTTCAGAGTGACTCACCTCGCGGTGACTCCGCCGGTGGTGGTGGCTATGGCGAAGGGAGATGTAACGGACGGTTACGATTTGAGCTCGCTGGAAGGCATCTCTTGCGGGGCGGCTCCGTTAGGAAAGGACGCCGTCGCGGCTTTCAAATCGAAGTTCCCCGGAGTCGTGCTCGGCCAGGGCTATGGGTTAACAGAAACAACGGCATCGATCTGTCGAACCACAGGTGAAGGAGATGCCACTAAGACAGGAACAACCGGGAAGCTAATAGCAGGTGTTGAAGCCAAAATTGTGGACCCAGACACTGGACTGCCCTTGTCTCCTGGCCAAGAAGGTGAACTTTGGCTCAGAGGACCCTCTATAATGAAAGGTTATGTTGGGGATCCAGACGCAAACTCGTCGACTTTTGTTGGAGGGTGGTTGAGGACAGGAGACTTGTGCTACTTTGACCACCAAGGCTACCTTTACGTTGTTGACAGATTGAAAGAACTGATCAAATACAAGGGATACCAGGTGGCTCCTGCGGAGTTGGAAAACTTGCTTCAATCCCATCCACAGATCAAGGACGCTGCGGTTATTCCATACCCTGATGAAGAAGCAGGGCAGGTGCCCATGGCATTTGTGGTGAGGCAACCCCACAGCTCACTTAGTGAAGCGGACGTAATTGATTTTGTTGCCAAGCAGGTTTGCATATCTCATCCCTATGGTGCATGTTCTATATTTGAACTGTCACCAAATTTTTCATATGAGTGGCTGCTGGGAGATATCTTCACCAGTGATATCTTCCTTGTATTCAAATGGAGCTTTAAAAATTTGACCCAAAAAAAATGGAGCTTCAAAAAGGATGAATTGTGGTTTTTTTTTTTTTAA 1695 0.5133 MENVDSKSGFCSDSRTFHSLRPPVHLPPPHSPLSASQYALSLRLKSPWPDSVPALIDAASSHRVSFSEFIHFSQTLASNLQSVVGLSKGDTAFVLSPNLIKVPILYFALLSLGVVVSPANPISTRAEISHLFQLSSPVIAFTTSSTAQNLPHSLRLGVILLDSPEFDSLMTTARSLTKPVVPRVEVSQSDIAAILYSSGTTGKVKGVMLSHRNLIALAASYDASRPQRERPAVFLYTIPYFHVYGFTYCLRSVVLSETVVLMERFRMEKMLRAVDEFRVTHLAVTPPVVVAMAKGDVTDGYDLSSLEGISCGAAPLGKDAVAAFKSKFPGVVLGQGYGLTETTASICRTTGEGDATKTGTTGKLIAGVEAKIVDPDTGLPLSPGQEGELWLRGPSIMKGYVGDPDANSSTFVGGWLRTGDLCYFDHQGYLYVVDRLKELIKYKGYQVAPAELENLLQSHPQIKDAAVIPYPDEEAGQVPMAFVVRQPHSSLSEADVIDFVAKQVCISHPYGACSIFELSPNFSYEWLLGDIFTSDIFLVFKWSFKNLTQKKWSFKKDELWFFFF 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5548g00062 564 SUPERFAMILY Acetyl-CoA synthetase-like 53 503 - -
Pral5548g00062 564 Pfam AMP-binding enzyme 52 442 IPR000873 -
Pral5548g00062 564 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Pral5548g00062 564 Gene3D - 438 520 IPR045851 -
Pral5548g00062 564 Pfam AMP-binding enzyme C-terminal domain 451 504 IPR025110 -
Pral5548g00062 564 CDD 4CL 22 504 - -
Pral5548g00062 564 Gene3D - 30 437 IPR042099 -
Pral5548g00062 564 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5548g00062 Pral-Chr5548 458694 462663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5548g00062 4 510 Monolignol Biosynthesis Gene Families AT5G63380 50.192 2.33e-174 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5548g00062 K01904 - qsu:111992510 679.863