Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5548g00061 ATGGAGAATGTTGATTCAAAGAGCGGTTTCTGTTCGGATTCTAGAACCTTCCACAGCCTCAGACCTCCCGTTCATCTTCCTCCTCCTCACTCTCCCCTCTCTGCTTCACAGTACGCTCTCTCTCTCCGTCTCAAATCGCCCTGGCCCGACTCAGTTCCCGCCCTTATCGACGCGGCCTCCAGCCACCGAGTTTCCTTCTCCGAGTTCATCCATTTCTCACAAACCTTAGCTTCTAATCTACAATCTGTTGTTGGCCTCTCCAAAGGCGACACAGCCTTTGTACTATCCCCCAACCTCATTAAGGTTCCGATCCTCTACTTCGCCCTGCTTTCCCTTGGGGTTGTCGTCTCTCCGGCTAACCCAATCAGCACACGCGCCGAGATTTCCCACCTGTTCCAGCTATCGTCGCCGGTCATTGCCTTCACAACGTCGTCCACAGCACAAAACCTTCCGCACAGCCTACGCCTCGGAGTCATCCTTCTCGACTCACCTGAGTTCGACTCGCTGATGACGACGGCAAGAAGCCTCACGAAACCAGTGGTCCCGCGCGTGGAGGTGAGCCAATCAGATATAGCCGCGATTTTGTACTCTTCGGGGACCACGGGGAAGGTGAAGGGAGTAATGCTGAGTCACCGGAATCTGATAGCATTAGCGGCGAGTTACGACGCGAGTCGTCCTCAGAGAGAAAGGCCGGCGGTTTTCCTCTACACGATACCGTATTTTCACGTGTACGGTTTCACCTACTGTCTCAGGTCGGTTGTGCTATCAGAGACGGTGGTGCTGATGGAGAGGTTCAGAATGGAGAAGATGTTGCGGGCGGTGGATGAGTTCAGAGTGACTCACCTCGCGGTGACTCCGCCGGTGGTGGTGGCTATGGCGAAGGGAGATGTAACGGACGGTTACGATTTGAGCTCGCTGGAAGGCATCTCTTGCGGGGCGGCTCCGTTAGGAAAGGACGCCGTCGCGGCTTTCAAATCGAAGTTCCCCGGAGTCGTGCTCGGCCAGGGCTATGGGTTAACAGAAACAACGGCATCGATCTGTCGAACCACAGGTGAAGGAGATGCCACTAAGACAGGAACAACCGGGAAGCTAATAGCAGGTGTTGAAGCCAAAATTGTGGACCCAGACACTGGACTGCCCTTGTCTCCTGGCCAAGAAGGTGAACTTTGGCTCAGAGGACCCTCTATAATGAAAGGTTATGTTGGGGATCCAGACGCAAACTCGTCGACTTTTGTTGGAGGGTGGTTGAGGACAGGAGACTTGTGCTACTTTGACCACCAAGGCTACCTTTACGTTGTTGACAGATTGAAAGAACTGATCAAATACAAGGGATACCAGGTGGCTCCTGCGGAGTTGGAAAACTTGCTTCAATCCCATCCACAGATCAAGGACGCTGCGGTTATTCCATACCCTGATGAAGAAGCAGGGCAGGTGCCCATGGCATTTGTGGTGAGGCAACCCCACAGCTCACTTAGTGAAGCGGACGTAATTGATTTTGTTGCCAAGCAGGTTGCACCGTACAAGAAAATAAGGCGCGTATTATTTGTGAGTTCCATCCCAAAGAACGCAGGAGGAAAAATTTTGAGGAAAGAATTGAGTAAATCTGTCATCCAGCAATCTCTATCTAAATTGTAA 1635 0.5229 MENVDSKSGFCSDSRTFHSLRPPVHLPPPHSPLSASQYALSLRLKSPWPDSVPALIDAASSHRVSFSEFIHFSQTLASNLQSVVGLSKGDTAFVLSPNLIKVPILYFALLSLGVVVSPANPISTRAEISHLFQLSSPVIAFTTSSTAQNLPHSLRLGVILLDSPEFDSLMTTARSLTKPVVPRVEVSQSDIAAILYSSGTTGKVKGVMLSHRNLIALAASYDASRPQRERPAVFLYTIPYFHVYGFTYCLRSVVLSETVVLMERFRMEKMLRAVDEFRVTHLAVTPPVVVAMAKGDVTDGYDLSSLEGISCGAAPLGKDAVAAFKSKFPGVVLGQGYGLTETTASICRTTGEGDATKTGTTGKLIAGVEAKIVDPDTGLPLSPGQEGELWLRGPSIMKGYVGDPDANSSTFVGGWLRTGDLCYFDHQGYLYVVDRLKELIKYKGYQVAPAELENLLQSHPQIKDAAVIPYPDEEAGQVPMAFVVRQPHSSLSEADVIDFVAKQVAPYKKIRRVLFVSSIPKNAGGKILRKELSKSVIQQSLSKL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5548g00061 544 Gene3D - 30 437 IPR042099 -
Pral5548g00061 544 SUPERFAMILY Acetyl-CoA synthetase-like 53 537 - -
Pral5548g00061 544 Gene3D - 438 540 IPR045851 -
Pral5548g00061 544 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Pral5548g00061 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 534 - -
Pral5548g00061 544 Pfam AMP-binding enzyme 52 442 IPR000873 -
Pral5548g00061 544 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Pral5548g00061 544 CDD 4CL 22 532 - -
Pral5548g00061 544 FunFam 4-coumarate--CoA ligase 2 438 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5548g00061 Pral-Chr5548 457988 462574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5548g00061 4 544 Monolignol Biosynthesis Gene Families AT5G63380 50.903 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5548g00061 K01904 - qsu:111992510 728.783