Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5548g00038 ATGGGAACAGCAAGAATCAGGCGAATTGTGACACCGTGTTGGAGGCCATCATCGCGTAATGAGACAGAGAATAATTCTAGTAAGAATGGGGATTCCAATGGTCGTGTGGACGGGTTGATGTGGTACAAGGATTGTGGGAGACATGTGAATGGAGAATTCTCCATGGCTGTTGTTCAGGCGAACAATTTGTTGGAAGATCAAAGCCAGCTTGAATCTGGTTCTATGAGTTCTTTTGAAGATGATGGCCCTCAAGGCACTTTTGTTGGCATTTATGATGGCCATGGAGGTCCTGAAGCTGCTCGCTTTGTCAATGACCACCTCTTCAACAACATCAAAAGATTTACTTCAGAGCATCATGGGATGTCAGAAGAGGTGATAAAGAAAGCATTTTTGGAAACAGAAGAGGAGTTTCTAAGCGTAGTGCAGGAGCAGTGGGTGAAGAAGCCACTGTTAGCATCAGTTGGAAGTTGTTGTTTGATAGGCATAATCTGCAACGGCGTGGTGTACGTAGCTAATGCTGGAGACTCTCGTGCTGTGTTAGGGCGACTCCATAATAAGGCTCACAAAGAGATCAAGGCCATTCAGTTGTCTTCTGAGCACAACGCCAGCATGGAATCTGTGAGACATGAGCTACGTTCCTCTCACCCCCATGATCCTCACATCGTCATCCTCAAGCACAGGGTCTGGCGTGTCAAAGGCATCATTCAGGTTTCGAGATCCATAGGAGATGCATATCTGAAGAGGGCAGAGTTTAACAAAGAACCACTTCTGGCGAAATTTAGGGTATCAGAGCCCTTTGAGAAGCCGATCCTGAAAGCAGAACCAACGATAAGTGTGCAAAAACACCACCCAGATGATCAGTTCATTATATTTGCGTCAGATGGCTTGTGGGAGCACTTGACCAATCAAGAAGCTGTTGAAATCGTGTACAACTATCCCCGCAATGGAATAGCTCGGAGGCTGGTGAAAGCGGCGCTGTGTGAGGCGGCGAAGAAGAGAGAGATGAGATACTCAGACTTGAAGAAGATAGAGAGAGGAGTGAGAAGGCACTTCCATGACGACATAACTGTCATTGTTTTGTATTTGGATTAA 1092 0.4615 MGTARIRRIVTPCWRPSSRNETENNSSKNGDSNGRVDGLMWYKDCGRHVNGEFSMAVVQANNLLEDQSQLESGSMSSFEDDGPQGTFVGIYDGHGGPEAARFVNDHLFNNIKRFTSEHHGMSEEVIKKAFLETEEEFLSVVQEQWVKKPLLASVGSCCLIGIICNGVVYVANAGDSRAVLGRLHNKAHKEIKAIQLSSEHNASMESVRHELRSSHPHDPHIVILKHRVWRVKGIIQVSRSIGDAYLKRAEFNKEPLLAKFRVSEPFEKPILKAEPTISVQKHHPDDQFIIFASDGLWEHLTNQEAVEIVYNYPRNGIARRLVKAALCEAAKKREMRYSDLKKIERGVRRHFHDDITVIVLYLD 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5548g00038 363 MobiDBLite consensus disorder prediction 13 33 - -
Pral5548g00038 363 SUPERFAMILY PP2C-like 77 363 IPR036457 -
Pral5548g00038 363 SMART PP2C_4 46 360 IPR001932 -
Pral5548g00038 363 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Pral5548g00038 363 Gene3D - 34 363 IPR036457 -
Pral5548g00038 363 ProSiteProfiles PPM-type phosphatase domain profile. 52 362 IPR001932 -
Pral5548g00038 363 FunFam Phosphatase 2C family protein 41 363 - -
Pral5548g00038 363 PANTHER PROTEIN PHOSPHATASE 27 360 IPR015655 GO:0004722|GO:0006470
Pral5548g00038 363 Pfam Protein phosphatase 2C 77 326 IPR001932 -
Pral5548g00038 363 MobiDBLite consensus disorder prediction 15 33 - -
Pral5548g00038 363 CDD PP2Cc 78 362 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5548g00038 Pral-Chr5548 329407 333938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5548g00038 1 362 PP2C-type Phosphatase Gene Family AT3G55050 72.376 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5548g00038 K01102 - tcc:18586300 566.229