Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5548g00032 ATGTTGTCTTGTGGAGGGGAAAATCATGGGAGGAGAAATATGGTGTCGTGTTTTCGTGTTGTTGAGCCTGAGGATTCACCACGCTCCGCCCCGCCGACCCTTGGACAGTTTTTGAATTATTACGGGGACGTTCGGAAGGAAGAATCAGGTGATGGGGGCGACACGCCGGAGCACCGTGCACTTGATATGACTGACGTCGGACTTGAGCAGCGCTCTGTGCCTTTTGTGCTCGAGTTTAGCAACCTCATGTACAGTGTGAAGGTTCGCCGGAAAATGAGCTTCTCAATGCTTTATCCGAAGTTGAAGGGAGCGGCCGCGGCGGATGATGGAACTAAGACTCTGCTGAATGATATCTCCGGAGAGGCACGCGACGGAGAGATCCTCGCCGTTATGGGGGCTAGCGGGTCAGGGAAATCAACTCTGATCGACGCCTTGGCTAATCGAATTGCCAAGGGAAGCTTGAAAGGAAAAGTGACGTTGAACGGCGAGGCCTTAGAATCGCGGCTTCTGAAAGTGATATCGGCATATGTAATGCAAGACGATCTTCTCTTTCCGATGCTCACGGTGGAAGAGACTCTGATGTTCGCCGCCGATTTCCGATTGCCTCGCACGCTCTCAAGGTCCAAGAAGAAGATGCGAGTACAAGCTCTCATCGACCAGCTCGGTCTCAGGAATGCCGCCAAAACCGTCATTGGCGACGAAGGCCACCGAGGGGTTTCCGGCGGCGAACGTCGCCGTGTCTCCATAGGCATTGACATAATCCACGACCCCATCATCTTGTTCCTCGACGAACCAACCTCAGGGCTCGATTCCACAAGCGCATACATGGTGGTGAAGGTTTTGCAGAGAATCGCACACACCGGAAGCATCGTGATCATGTCCGTGCACCAACCTAGCTCCCGACTCCTCGGACTCCTCGACAGAATGATCTTCTTGTCTCGCGGCCAAACAGTGTTCAGTGGCTCACCCATGCAACTTCCGATCTTCTTCTCTGAATTCGGACACCCAATACCAGAAAACGAGAACCGAACCGAGTTCGCTCTGGACCTGATTCGCGAGCTCGAATCCTCACCTGGGGGAACAAAGAGCTTGGTCGAGTTCAACAAGTCGTGGCAAAGCATCATGAATCATCCAGGAATCAGAAACGAGAAGATTAATCAGAACGATTTGTCTCTGAAAGAAGCCATTAGTGCGAGCATCTCCAGAGGAAAACTGGTTTCAGGTGCGACAAACACCAACAACGTAAGCCCAACTTCGATGGTTCCAACGTTCGCGAATCCATTCTGGGTTGAAATGGTGAAACTTTCGAAAAGATCATTCACCAATTCACGTAGAATGCCTGAACTGTTTGGGATTCGATTGGCTGCCATTTTAGTAACTGGGTTTATTCTCGCCACCATGTTTTGGCAATTAGATAACTCTCCAAAAGGCGTCCAAGAAAGACTCGGCTTCTTCGCTTTCGCCATGTCCACCACTTTCTACACCACCGCCGACGCACTTCCGGTGTTCCTCCAAGAACGATACATTTTCATGAGAGAAACTGCTCACAACGCTTACCGGCGATCATCCTATCTCATATCCCACGCCCTGGTTTCGCTACCTGCATTGCTTATACTCTCACTGGCTTTTGCAGCGACGACGTTTTGGGCGGTGGGGCTCGACGGAGGATTACAAGGGTTCTTCTTCTACTTCCTCGTCATCTTCGCTTCGTTCTGGGCCGGAAACTCCTTCGTCACCTTCCTCTCCGGCGTAGTACCTCACGTGATGCTGGGATACACAATAGTGGTAGCTATCTTAGCATATTTCTTACTGTTCAGTGGATTCTTCATCAACAGAGACAGAATCCCAAGTTACTGGATTTGGTTTCATTACTTGTCTCTTGTGAAGTACCCATATGAAGCTGTTCTACAGAACGAGTTTGATGATCCAGTGAAGTGTTTCGTAAGAGGGGTTCAAATTTTTGATAATACGCCGCTTGGGGTTGTGCCAGGATCAACGAAATTGAAGTTATTGGAGAGTTTGAGCAGCACTTTGGGGACGAACATAACCAGTTCAACGTGTTTGACGACAGGTTCTGATATATTGCAGCAGAATGGGATTACACAGTTGAGCAAGTGGAATTGCTTGTGGGTTACAGTGGGTTGGGGATTCTTGTTTAGGATTCTCTTTTACTTCTCTTTGTTGTTGGGAAGTAAGAACAAGAGGAGGTGA 2211 0.4953 MLSCGGENHGRRNMVSCFRVVEPEDSPRSAPPTLGQFLNYYGDVRKEESGDGGDTPEHRALDMTDVGLEQRSVPFVLEFSNLMYSVKVRRKMSFSMLYPKLKGAAAADDGTKTLLNDISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGKVTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAADFRLPRTLSRSKKKMRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAHTGSIVIMSVHQPSSRLLGLLDRMIFLSRGQTVFSGSPMQLPIFFSEFGHPIPENENRTEFALDLIRELESSPGGTKSLVEFNKSWQSIMNHPGIRNEKINQNDLSLKEAISASISRGKLVSGATNTNNVSPTSMVPTFANPFWVEMVKLSKRSFTNSRRMPELFGIRLAAILVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAHNAYRRSSYLISHALVSLPALLILSLAFAATTFWAVGLDGGLQGFFFYFLVIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGVVPGSTKLKLLESLSSTLGTNITSSTCLTTGSDILQQNGITQLSKWNCLWVTVGWGFLFRILFYFSLLLGSKNKRR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5548g00032 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 59 722 - -
Pral5548g00032 736 ProSitePatterns ABC transporters family signature. 239 253 IPR017871 GO:0005524|GO:0016887
Pral5548g00032 736 Gene3D - 101 328 IPR027417 -
Pral5548g00032 736 FunFam ABC transporter G family member 6 104 330 - -
Pral5548g00032 736 Pfam ABC transporter 115 267 IPR003439 GO:0005524
Pral5548g00032 736 SMART AAA_5 124 316 IPR003593 GO:0016887
Pral5548g00032 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 339 IPR003439 GO:0005524
Pral5548g00032 736 Pfam ABC-2 type transporter 435 640 IPR013525 GO:0016020|GO:0140359
Pral5548g00032 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 326 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5548g00032 Pral-Chr5548 286098 288464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5548g00032 114 300 Calmodulin-binding Proteins AT2G36910 30.000 5.98e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5548g00032 K05681 - qsa:O6P43_006042 1142.49