Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5548g00031 ATGGACATTGGCGAACCATCGTGCATCATAGTAGCTGAATTGCCCACCCTCCGGGAACTCTTCCAGCTCGAAGATGACGCGGAGAGGGAAGCCGCCGGCTACGACAGTATCGCGACGGAGTACCACACGCCTGAACGGACTGATTCAAGTGTCGTGCCAGCTCGCTCGTCGTCTTTTGCGCTCACGTTCAATAATCTCACATACAGTGTGAAGGTCCGCCAGAGAATGAACTTCTCAGCGTGGTTCTCGCGACAAAGGAATAACCGTCTCGGAGCACCAGAAACTAAGATTCTTCTGAATGATATCTCCGGCGAGGCTCGCGACGGTGAGATTCTTGCCGTTATGGGAGCTAGTGGTTCAGGGAAATCCACTCTGATTGACGCCTTGGCCAACCGAATAGCTAAAGGCAGCTTGAAAGGGAGCGTGAGATTGAACGGCGAGGCCTTAGAATCGCGGCTTCTGAAAGCAATTTCAGCCTATGTAATGCAAGATGACCTTCTCTTCCCGATGCTCACAGTGGAAGAGACTCTAATGTTCGCAGCTGAATTCCGATTACCATGCAGTCTCTCTAGATCCAAGAAGAAGATGCGAGTACAAGCTCTGATCGACCAGCTCGACCTCAGAAACGCAGCGAAAACCGTCATCGGCGATGAAGGCCACCGTGGTGTGTCCGGCGGCGAACGACGGCGTGTCTCCATCGGCATTGATATAATCCACGACCCGATCATATTGTTCCTCGATGAACCTACATCGGGACTGGATTCCACGAGCGCATTCACGGTGGTGAAGGTCTTGCAGACAGTTGCACACACCGGAAGCATCGTCGTCATGGCCATCCACCAACCGAGTTCGCGAATTCTTGGTCTTATCGACAGAATAATCTTCTTATCTCGCGGGGAAATTGTGTTCAGTGGTTCGCCTATGCAACTTCCCCACTTCTTCGCTGAATTTGAACACCCGATTCCAGAAAATGAGAACCAAACCGAGTTTGCATTGGACCTGATTCACGAGCTAGAAGAGGGGTCATCTAGTGGAACTCATAGATTGGTGGAATTTAACAAGTCGTGGCAGAGCAAGAAGCAGTCGGGAAGTAATAGTGGCCCATCAGAAGGTGACTATCACCATGGATTATCATTGAAAGAAGCGATCAATACAAGCATGTCGAGGGGAAAACTAGTGTCAGGAATCACAAAAACAAGTGATAATAACGCAGTAATAAGATCATCATCAACTTCAAAGGTACCAACATTTGCGAACCCAATGCTGATCGAAGTGGCAAAGCTCTCAATACGATCATACACCAATTCACGAAGAACGCCTGAAATATTCCGGACCCGATTGGCCATAGTACTCATCACTGGCTCACTTTTAGCTTCAGTGTTTTGGCGTTTAGATGATTCTCCAAAAGGGGTTCAAGAAAGGCTTAGCTTCTTCGCTTTCGCCATGTCTTCCACCTTCTACACTACAGCAGAAGCTCTCCCTTTGTTCCTTCAAGATCGATATATTTTCATGAGAGAAACTGCTTACAACACTTACCGCAGGTCCTCTTATATCGTCTCTCACGCTCTTGTGTCCTTACCTTCTTTGCTTGTCCTCTCATTAGCTTTCGCAGCGACGACGTTTTGGGCAGTGGGGCTTGATGGAGGATGGTTCGGTTTCTTGTTCTATTTCGTCTTCATATTTGCTTCTTTCTGGGCAGGTAATTCCTTCGTCACCTTCCTCTCTGGTGTGCTACCTCACGTGATGGTCGGATATACCATAGTGGTGAAGTCCTTAGCATATTTCTTGCTGTTCAGTGGATTCTTCATTAACAGAGACAGAATTCCAGTTTATTGGATTTGGTTTCACTACTTGTCTTTGGTGAAATACCCATATGAAGCTGTGATGCAGAACGAGTTTGATGACCCAGTGAGTTGCTTTATGAGAGGGGTTCAGGTTTTCGATAACACTCCACTCGGCGAGTTGCCGGGTTCCGTGAAACTGAAGCTATTACAGAGCTTGAGTGCTACATTAGGGACAAATATAACGAGCTCAACGTGCTTGACGAGAGGCAGTGATATATTGCAGCAGAATGGGATAACTCAGCTAAGCAAATGGAACTGTTTGTGGGTAACAGTGGGTTGGGGATTTTTGTTTAGGGCTCTGTTTTACTTCTCGTTGTTGCTAGGGAGCAAGAATAAGAGGAGATAA 2190 0.4753 MDIGEPSCIIVAELPTLRELFQLEDDAEREAAGYDSIATEYHTPERTDSSVVPARSSSFALTFNNLTYSVKVRQRMNFSAWFSRQRNNRLGAPETKILLNDISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGSVRLNGEALESRLLKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPCSLSRSKKKMRVQALIDQLDLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFTVVKVLQTVAHTGSIVVMAIHQPSSRILGLIDRIIFLSRGEIVFSGSPMQLPHFFAEFEHPIPENENQTEFALDLIHELEEGSSSGTHRLVEFNKSWQSKKQSGSNSGPSEGDYHHGLSLKEAINTSMSRGKLVSGITKTSDNNAVIRSSSTSKVPTFANPMLIEVAKLSIRSYTNSRRTPEIFRTRLAIVLITGSLLASVFWRLDDSPKGVQERLSFFAFAMSSTFYTTAEALPLFLQDRYIFMRETAYNTYRRSSYIVSHALVSLPSLLVLSLAFAATTFWAVGLDGGWFGFLFYFVFIFASFWAGNSFVTFLSGVLPHVMVGYTIVVKSLAYFLLFSGFFINRDRIPVYWIWFHYLSLVKYPYEAVMQNEFDDPVSCFMRGVQVFDNTPLGELPGSVKLKLLQSLSATLGTNITSSTCLTRGSDILQQNGITQLSKWNCLWVTVGWGFLFRALFYFSLLLGSKNKRR 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5548g00031 729 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Pral5548g00031 729 FunFam ABC transporter G family member 6 88 314 - -
Pral5548g00031 729 CDD ABCG_EPDR 61 305 - -
Pral5548g00031 729 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 715 - -
Pral5548g00031 729 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524|GO:0016887
Pral5548g00031 729 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 323 IPR003439 GO:0005524
Pral5548g00031 729 Pfam ABC-2 type transporter 428 633 IPR013525 GO:0016020|GO:0140359
Pral5548g00031 729 MobiDBLite consensus disorder prediction 356 375 - -
Pral5548g00031 729 SMART AAA_5 108 300 IPR003593 GO:0016887
Pral5548g00031 729 Gene3D - 86 315 IPR027417 -
Pral5548g00031 729 MobiDBLite consensus disorder prediction 356 371 - -
Pral5548g00031 729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5548g00031 Pral-Chr5548 278475 281775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5548g00031 93 300 Calmodulin-binding Proteins AT2G36910 27.556 2.41e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5548g00031 K05681 - qsa:O6P43_006042 990.719