Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5548g00029 ATGGGTTCTTCCAGTTCCAACCATAAGGCTTTTATTGGAGTTTCATCCATTTTCTGGTTGATCTGGGTTTCATTGGGAGGTATTTCTGGCGATGACTTTTTCATAGACTGTGGATCTCCCAACATCACTAAAGTGGGAGAACGTGTATTTGTGGCTGATAATTCTACTTCTAGGCTTCTTTCAACCTCAAGAATTATTTTGGCAAAGGCAGACTCCGCCGTTGTTCTTCCATCATCTTTTGATTCAAACCTGTACCGAACTGCTAGAATCCTTGAAGGTGTTTCTCGATACACATTCCCAATCAAAAAACATGGTAGGTACTGGATTCGCTTGTACTTCTTCCCTTTTAGTTTTGGAAGCCACAACATGAGCTCTGCAAAATTCTCTGTTTCTGCTCAAGAAAGCACCACCCTGCTGAAAGATTTTCAGTTGGATAGTGGTGTTGTACGGAAGGAATACTCTTTGAACATCTCTGAGAGCCAGCTTGTACTCACTTTCACACCTTCTTCTAAATCATTTGCATTCATAAATGCCTTAGAAGTTATCTCAATTCCTGATAAGGTTATTCCTGAGCATGTTGAGAGTGTTCACCCGCAAGGTGATGATGATAAGAATCTCTGGAAGCAGGCTTTGGAAACTCTTGCCAGAGTGAACATGGGAAATCAATCTGTGTCACCTCTAAATGATAGCTTGGGCCGTGATTGGGTGCCAGATGGTTCGTTTCTTATTCACAGGAATTTTGCCAATTTCACATCCAACGTTACAGCAGTTAATTTCAAAGCAGCAAACATGTCAGATGTTATTGCACCAGCTGAGGTATATGGTACTGTGACTTCATTGAAAGTTGTTGATCAAGATCCCAGATCCAAAGCAAATATGACATGGCTTTTTAATGTTGATCCTGGCTTTGATTATCTGCTTCGGTTTCACTTCTGTGACGTTGTGAATCTACCACCTGACACTCTCTTCAGTGTTTATGTTAACTCGGGGCTTGTTTCTACTATCAATGTTGGCACGGCAATGCCGCATCAAGGAGCCCCATATTATGTGGATGCAATCACAAGAGTAAGTGGTAGCTCTAATTTAACTGTCTCTGTTGGCACACCTAGTCCAGGTGATAATGTTTCTCCAGTCTTTCTCAATGGGCTTGAGATCATGAAAATGAGCAATTCAGAGGATAGCCTGGTCTTGGACCCTAAGAGCAGTTCCAAGAAAAAACTTGGTATCATAATAGCAGGTTGTGTGGCGGGTTTGGTTGTGATTCTTTTAGTTGCGGCTATGGCTGTTGTGTTACTATACCGAAGAAGGAGGAACCGTCTCCATGTTAGTCATGAAAATGGGAAGGACCTTCCTGGTATGAGTGGGATGGATCATTCTAACATCTTTTCCAACTCAAAAATTGGGTATCGTTTTCCACTTGCAATCATCCAAGACGCAACTAATAATTTCAGTGAAGATCTAGTCATTGGTGTGGGAGGTTTTGGGAAGGTTTACAAAGGAGCGTTCAGAGATGAAACAAAGGTGGCTGTGAAGAGGGGATCATCTCAATCGCAACAAGGTCTTGCAGAGTTCAGAACTGAAATTGAGATGCTATCTCAGTTTCGCCACCGGCATCTGGTATCATTGATCGGTTACTGCCACGACCAAGATGAGAGAATCATCATATATGAATACATGGAAAATGGTACATTAAAGAACCATTTATATGGATCAGATGATAAACCAAGCTTAAATTGGAGGCAAAGGTTAGAAGCATGCATAGGAGCAGCCAAAGGGCTTCACTATCTTCACACTGGCTCTACCAAGGCAATTATTCACCGTGATGTTAAATCAGCAAATATACTTCTGGATGAGAACTTCATGGCTAAGGTTGCTGATTTTGGTCTTTCAAAGACAGGACCTGAGATTGATAAGACGCATGTCAGCACTGCAGTGAAAGGAAGCTTTGGATATCTTGATCCAGAATACTTAACAACACAGCAACTCACAGAGAAATCAGATGTTTACTCCTTTGGTGTGGTCATGTTTGAAGTCCTCTGTGGTAGACCTGTGATAGACCCATCACTCCCAAGGGAAAAGGTGAATCTGATTGAATGGGTGATGAAATGTCTGGAGAGAAATAACTTGAAAGAGATCGTGGATCCTCGTCTCAATGATCAGATAGAGTCAGATTCGCTGAAAAAGTTTGTAGAGATTGCAGAAAAGTGCCTAGCTGAACATGGCAGTAACAGGCCTACCATGGGAGATGTGTTGTGGAACTTGGAGTATGCCCTAAGACAAGAAGGTGCTGGTCGCCACCAATCGTCACAGATTCATCAAATGGATCGCTCGAACACTGGTTTATCAGCTACAGAATACACCATGGGAAGCATGGGTGCCATCTCTGATGTTTCAATGAGCAAGGTGTTTGCTCAAATGGTGAGAAGAGAGGATATGAGGTAG 2442 0.4234 MGSSSSNHKAFIGVSSIFWLIWVSLGGISGDDFFIDCGSPNITKVGERVFVADNSTSRLLSTSRIILAKADSAVVLPSSFDSNLYRTARILEGVSRYTFPIKKHGRYWIRLYFFPFSFGSHNMSSAKFSVSAQESTTLLKDFQLDSGVVRKEYSLNISESQLVLTFTPSSKSFAFINALEVISIPDKVIPEHVESVHPQGDDDKNLWKQALETLARVNMGNQSVSPLNDSLGRDWVPDGSFLIHRNFANFTSNVTAVNFKAANMSDVIAPAEVYGTVTSLKVVDQDPRSKANMTWLFNVDPGFDYLLRFHFCDVVNLPPDTLFSVYVNSGLVSTINVGTAMPHQGAPYYVDAITRVSGSSNLTVSVGTPSPGDNVSPVFLNGLEIMKMSNSEDSLVLDPKSSSKKKLGIIIAGCVAGLVVILLVAAMAVVLLYRRRRNRLHVSHENGKDLPGMSGMDHSNIFSNSKIGYRFPLAIIQDATNNFSEDLVIGVGGFGKVYKGAFRDETKVAVKRGSSQSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCHDQDERIIIYEYMENGTLKNHLYGSDDKPSLNWRQRLEACIGAAKGLHYLHTGSTKAIIHRDVKSANILLDENFMAKVADFGLSKTGPEIDKTHVSTAVKGSFGYLDPEYLTTQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPREKVNLIEWVMKCLERNNLKEIVDPRLNDQIESDSLKKFVEIAEKCLAEHGSNRPTMGDVLWNLEYALRQEGAGRHQSSQIHQMDRSNTGLSATEYTMGSMGAISDVSMSKVFAQMVRREDMR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5548g00029 813 FunFam Receptor-like protein kinase FERONIA 559 776 - -
Pral5548g00029 813 Gene3D Transferase(Phosphotransferase) domain 1 559 780 - -
Pral5548g00029 813 SUPERFAMILY Protein kinase-like (PK-like) 457 755 IPR011009 -
Pral5548g00029 813 Gene3D - 209 389 - -
Pral5548g00029 813 Gene3D - 33 184 - -
Pral5548g00029 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Pral5548g00029 813 FunFam receptor-like protein kinase FERONIA 452 558 - -
Pral5548g00029 813 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Pral5548g00029 813 SMART serkin_6 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5548g00029 813 Pfam Malectin-like domain 35 388 IPR024788 -
Pral5548g00029 813 PANTHER OS07G0166700 PROTEIN 470 760 IPR045272 GO:0004714|GO:0006468
Pral5548g00029 813 Pfam Protein tyrosine and serine/threonine kinase 488 751 IPR001245 GO:0004672|GO:0006468
Pral5548g00029 813 FunFam Putative receptor-like protein kinase 32 185 - -
Pral5548g00029 813 ProSiteProfiles Protein kinase domain profile. 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5548g00029 813 CDD STKc_IRAK 489 755 - -
Pral5548g00029 813 Gene3D Phosphorylase Kinase; domain 1 452 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5548g00029 Pral-Chr5548 250150 253148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5548g00029 7 810 Receptor kinase-like Gene Family AT2G39360 50.665 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral5548g00029 Malectin_like 2.5e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5548g00029 - - lang:109328391 964.526