Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5548g00020 ATGGATTTTCTCCTCGCTTCCGACACCCCAAACACCCCCATAATGGAATTTCAACTCCAAGCACTACTCTGCAACAGCGGCAACAATTTTCCACTCCAGAATCTCAATGCTCAGATTAATCATCCTCATCATCCTCCTCTTCCTCAGCTTCAAGATTTGGCGTCGTCTCAGTCGACTTCCGATGAAGCGGAGGATCAGACGGCGGTGGTGGCGGCGAACGAGAGGAGGCACCGGAGGATGATATCGAACAGGGAGTCGGCGCGTAGGTCACGGGCGAGGAAGCAGAAGCAGCTGGACGAGCTGTGGTCGCAGGTTGTTTGGCTGCGGAGCGAGAATCGGCAGCTGCTGGATAAGCTTAACCTTGTCTCGGATAGCCATGACCGAGCCCTTGAAGAGAATGTTCGTCTCAAACAGGAAGCTTCTGAGCTGCGTCAGATGCTCTGTGACATGCACTTACAATCCCCTGCTTCTCTTCCTTGA 480 0.5333 MDFLLASDTPNTPIMEFQLQALLCNSGNNFPLQNLNAQINHPHHPPLPQLQDLASSQSTSDEAEDQTAVVAANERRHRRMISNRESARRSRARKQKQLDELWSQVVWLRSENRQLLDKLNLVSDSHDRALEENVRLKQEASELRQMLCDMHLQSPASLP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5548g00020 159 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Pral5548g00020 159 Pfam bZIP transcription factor 74 126 IPR004827 GO:0003700|GO:0006355
Pral5548g00020 159 Gene3D - 73 128 - -
Pral5548g00020 159 FunFam BZIP transcription factor 73 124 - -
Pral5548g00020 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Pral5548g00020 159 Coils Coil 126 146 - -
Pral5548g00020 159 MobiDBLite consensus disorder prediction 50 66 - -
Pral5548g00020 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 125 IPR004827 GO:0003700|GO:0006355
Pral5548g00020 159 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 27 155 IPR044521 -
Pral5548g00020 159 MobiDBLite consensus disorder prediction 68 94 - -
Pral5548g00020 159 MobiDBLite consensus disorder prediction 35 94 - -
Pral5548g00020 159 SUPERFAMILY Leucine zipper domain 75 124 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5548g00020 Pral-Chr5548 180040 180965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5548g00020 30 157 bZIP Transcription Factor Family AT3G30530 58.015 2.68e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5548g00020 bZIP_1 1.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5548g00020 - - aprc:113863596 153.295