Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5547g00002 ATGTCTAGAGTTTCTTTGCTGAAAGATATCCATGAAGGTACTGATAGGTGGAGAGTCATTGTGAGGGGGAACAGGATCCAAGCAAGTGTTTTAAACAGGAACTTGCTCCCTCTATACAAGGATGCTCCAGTGGAAGGAAATACCTACTTTTTTACCAACTTTGAGGTGTCTCCTAATGTGAATCAGTACAGGGCGACGGAAAACAAATGGAAGATAACATTCACTCAACAAACTTACATGAGGGAGCAAGGTGGGAATATTCCGCATGATGCCTACTCTTTTGTTCCACTTCCAGAGATTGTTAAGTGTACTGAAAGGAATCATTTGGAGTATCTGATTGATGTGGTGGCATTCGTCCAATCAATTGGATCTCTTGAAGAGTATCAAAAGGATAATGAAACGAAGCACAAGTTGCGGATGGTTTTAGTTGATGAGGATGAGATTGATGTGGAGTGTGTCTTATTTGATGAATGCTCAACAAATGCATACACGGCTTATTTGGAGAACATGGAGAACCCAGTTGTTGTGGTCATTAATTTGGCTAGGGTTGGATTCACTGATGATGCATATCTGACATATGACAGTGACAGTCTCATTCACTTCATTATGCAAATATGTAGGTCCAAAGACAAATTCTCACCTTCTCTGACTGTGCTAAGCCAGCAGATCCCATCTCAATCTTCTCAACCTTCTGCTTCAGCAATGATGCGCAATAACAGGAGGATGAATATATCTGACATTGAACATGAAGCAAGAGAGGAGGCATTCATTATTAACTGCAAGGTCATTAAGCTAGAGACTCGCCATGGTTGGAGTTATGATGGGTGCTCAAAGTGTGCAAGCAAGCCTAAGGAGGAGAATGGTTCGCTGCACTGCTCTAACTATAAAAAGAAACCTCAATCCGTCGAGCCTAAATTGAAGGTACACTATGTTGTGGAAGATCAATCTGGGAAAACTTCTGTAATCTTCTGGGACAAGTTAGTTGTGCAATTGTTCAACAAGAATGCAACTGAAATAAAGCTAACACTAGAGCAGTCAGGGATGGAGGAAATTGATGAAGGTAGTTCAACAGCTGAGATGAGTCCACCTCTTGGGCACTCAACTCCTACTGCACCTGATAATTCTGAGAGCCTGACGTTAGCTGAAATAAGTAACCAAGCATATGGATTTGGTGTTCTTATAAAAGGCAAAAGGAAGACTGTTTCCAAGAAGTCTTCTGTTTTTGTGGATCATGTCAACAATATCAATGACCCCTCATCTTTAAAGGACCTGGGAAGGATTGTGAAGGTCAAGCAGGAGAAGAAGTAG 1308 0.4144 MSRVSLLKDIHEGTDRWRVIVRGNRIQASVLNRNLLPLYKDAPVEGNTYFFTNFEVSPNVNQYRATENKWKITFTQQTYMREQGGNIPHDAYSFVPLPEIVKCTERNHLEYLIDVVAFVQSIGSLEEYQKDNETKHKLRMVLVDEDEIDVECVLFDECSTNAYTAYLENMENPVVVVINLARVGFTDDAYLTYDSDSLIHFIMQICRSKDKFSPSLTVLSQQIPSQSSQPSASAMMRNNRRMNISDIEHEAREEAFIINCKVIKLETRHGWSYDGCSKCASKPKEENGSLHCSNYKKKPQSVEPKLKVHYVVEDQSGKTSVIFWDKLVVQLFNKNATEIKLTLEQSGMEEIDEGSSTAEMSPPLGHSTPTAPDNSESLTLAEISNQAYGFGVLIKGKRKTVSKKSSVFVDHVNNINDPSSLKDLGRIVKVKQEKK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5547g00002 435 Gene3D - 21 83 IPR012340 -
Pral5547g00002 435 Gene3D - 224 417 IPR012340 -
Pral5547g00002 435 MobiDBLite consensus disorder prediction 345 375 - -
Pral5547g00002 435 Pfam Domain of unknown function DUF223 23 104 IPR003871 -
Pral5547g00002 435 SUPERFAMILY Nucleic acid-binding proteins 241 346 IPR012340 -
Pral5547g00002 435 SUPERFAMILY Nucleic acid-binding proteins 92 201 IPR012340 -
Pral5547g00002 435 Gene3D - 85 212 IPR012340 -
Pral5547g00002 435 MobiDBLite consensus disorder prediction 360 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5547g00002 Pral-Chr5547 13119 16877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5547g00002 23 339 Core DNA Replication Machinery Family AT5G08020 22.581 3.60e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5547g00002 - - pcin:129290097 355.525