Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5546g00003 ATGGCTTCTCCTAGTTCTTCCCCTTCTGCTGTTCCACCCACTTCTGCTGATAATTCCCCATCAAATTCTCTCGTATCATCACAGCCTCCCACTTCTAGCCCACCCAGTCAAACCTCTAATACCCCTGCTCCTTCATCTCCTTCTGACGCCGCAACCCCACCTCCTTCCCCATCTCTTTCTCCTCCACCAGCTACACCACCGCCAACTTCATCCCCACCGCCGGCATTGCCACCACCAGCTTCACCCCCGCCTGAAGCATTGCTGCCACCGGCTTCTCCCCCCCCTGAATCATTGTCCCCTCCGGCTTCAACCATGCCTCCAGCATTGCCACCACCATCTTTACCATCTACGCCAAATTCTCCTCCACCAACACCTTCAGCATTGCCACCACCATCACCTCCACCAGCATCTGTTTCCACCCCTCCTCCAGCTCAGAAGTCACCTGCTGCTCCAAATTTATCCCCACCACCTCCACCTCCTGCAGCAGATCCGCCTCCCTCTCACCGCAATTCTCCTCCTCCTCCAAAGAATGTCCCAAAATCACCATCCTCCGGTTCCCCTCCTCCACCTCTGGGAAAGCCACCAGAAAGTGCTCCTGTGCTTACACCCCCACCGTCTGTTTCCGACTCTCCTCCTTCTCCTCCTGCAGATGATCCCCCTCAATCTGCAACACCATCACCTTCTCCTCCTTCAGTTCCATCTGCTTCTTCATCCCCACCAACTGTTGCACCTTCTCCTCCAACTAATTCATCTGCAGCTGGGGGCCCAATTTCAGCCCTACCGTCTATTCCAACAGAGAAACCAACTGCAAAACCAACTGATAATACTAGTGTAACTGCAAATGCCCCACCCACACATAGAAAGGGGTTAAATACAGGAGGAGGTGTGGCTATTGGTGCCATAGTTGGCTTTGTTGTCCTCAGCCTTCTTATCATGGCAGTGTGGTTTGTAAAACGAAAGAGGAAGCAAACAGGATCAAAAGTTGGTTATGCTATGACCTCTCCATTTGGCTCATCTCAGAATTCAGGTACCATATTCTTGAGGCCACAGTCTCCAGCTCCCTACCATGGTAGTAACTCTGGAAGTGATCTCATGTATTCTCCATCGGAGCCTGGTGGAGTCAGTCAGTCGAGGTCATCATTCATGTATGAAGAACTTGTGCAAGCAACAAATGGGTTTTCAGCACAAAATCTTTTGGGTGAAGGTGGATTTGGTTGTGTCTTCAAAGGTTTGCTCCCTGATGGAAGAGAAATTGCTGTGAAACAGCTCAAAGTTGGTGGTGGGCAAGGGGAACGTGAATTTCAAGCAGAAGTGGAGATTATTAGCCGAGTGCATCATCGCCATCTGGTTTCCTTGGTGGGTTACTGTATATCACAACATCAAAGATTGCTTGTCTATGACTATTTGCCCAACGATACCCTTCATTACCATCTTCATGGTGAAGACAGGCCAGTTTTGGACTGGGTTACCAGGGTCAAGATTGCTGCTGGTTCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGAATTATTCACCGAGACATCAAGTCATCAAACATCCTTCTTGACAACAACTTTGAAGCTCGGGTTTCTGATTTTGGGCTTGCAAAATTAGCCTTGGATTCATACACACATGTAACTACGCGTGTAATGGGAACCTTTGGGTACATGGCACCGGAGTATGCAACAAGTGGGAAGTTGACTGAAAAATCTGATGTTTATTCTTATGGAGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCAGTTGGTGATGAGAGCCTAGTTGAATGGGCTCGTCCTTTGCTAAACGAAGTACTTGATAACGAAGACTTTGATATGTTGGTGGATCCAAGGTTAGAGAAGAACTATAATAAGAATGAAATGTTCCGGATGATCGAGGCAGCTGCAGCCTGTGTGCGTCACTCTGCAGCGAAGAGGCCCCGAATGAGTCAGGTTGTGAGAGCTTTAGATTTGATGGATGAACTAGCAGATCTGAATAATGGAATGAAGCCTGGGCAGAGCTCAGTATTTGATTCTGCAGAGCAAAATGAACAAATCAGAATGTTCAGGAGGCTGGCTTTTGGAAGCCAGGATTACAGTAGCAGTTATTTCAACGACTCCCATAGTAGCTGGAGAAGTAGAGATCAGAGCCAACACCACACCACTACTACCTTCTCCCAAAATAGGTCCGGACCATGGAACGTGTAA 2238 0.4861 MASPSSSPSAVPPTSADNSPSNSLVSSQPPTSSPPSQTSNTPAPSSPSDAATPPPSPSLSPPPATPPPTSSPPPALPPPASPPPEALLPPASPPPESLSPPASTMPPALPPPSLPSTPNSPPPTPSALPPPSPPPASVSTPPPAQKSPAAPNLSPPPPPPAADPPPSHRNSPPPPKNVPKSPSSGSPPPPLGKPPESAPVLTPPPSVSDSPPSPPADDPPQSATPSPSPPSVPSASSSPPTVAPSPPTNSSAAGGPISALPSIPTEKPTAKPTDNTSVTANAPPTHRKGLNTGGGVAIGAIVGFVVLSLLIMAVWFVKRKRKQTGSKVGYAMTSPFGSSQNSGTIFLRPQSPAPYHGSNSGSDLMYSPSEPGGVSQSRSSFMYEELVQATNGFSAQNLLGEGGFGCVFKGLLPDGREIAVKQLKVGGGQGEREFQAEVEIISRVHHRHLVSLVGYCISQHQRLLVYDYLPNDTLHYHLHGEDRPVLDWVTRVKIAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEARVSDFGLAKLALDSYTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSYGVVLLELITGRKPVDASQPVGDESLVEWARPLLNEVLDNEDFDMLVDPRLEKNYNKNEMFRMIEAAAACVRHSAAKRPRMSQVVRALDLMDELADLNNGMKPGQSSVFDSAEQNEQIRMFRRLAFGSQDYSSSYFNDSHSSWRSRDQSQHHTTTTFSQNRSGPWNV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5546g00003 745 MobiDBLite consensus disorder prediction 268 286 - -
Pral5546g00003 745 MobiDBLite consensus disorder prediction 35 246 - -
Pral5546g00003 745 MobiDBLite consensus disorder prediction 1 289 - -
Pral5546g00003 745 Pfam Protein tyrosine and serine/threonine kinase 396 666 IPR001245 GO:0004672|GO:0006468
Pral5546g00003 745 FunFam Proline-rich receptor-like protein kinase PERK8 365 468 - -
Pral5546g00003 745 FunFam proline-rich receptor-like protein kinase PERK8 469 681 - -
Pral5546g00003 745 CDD STKc_IRAK 399 669 - -
Pral5546g00003 745 ProSiteProfiles Protein kinase domain profile. 393 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5546g00003 745 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 304 711 IPR047117 -
Pral5546g00003 745 MobiDBLite consensus disorder prediction 1 34 - -
Pral5546g00003 745 SMART serkin_6 393 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5546g00003 745 Gene3D Phosphorylase Kinase; domain 1 367 468 - -
Pral5546g00003 745 SUPERFAMILY Protein kinase-like (PK-like) 371 667 IPR011009 -
Pral5546g00003 745 MobiDBLite consensus disorder prediction 353 376 - -
Pral5546g00003 745 MobiDBLite consensus disorder prediction 715 745 - -
Pral5546g00003 745 Gene3D Transferase(Phosphotransferase) domain 1 469 685 - -
Pral5546g00003 745 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Pral5546g00003 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5546g00003 Pral-Chr5546 42119 49269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5546g00003 285 662 Trihelix Transcription Factor Family AT1G68690 65.789 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5546g00003 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5546g00003 - - gmx:100790988 807.364