Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5545g00003 ATGGGCGTGGAGAATGATATTTCTCCGGCCGATGCTCATGGGGCTCCGGGAAAGGAGCAGCAAGCTGCCGGAGTGGGAATTCTTCTTCAGATCATGATGTTGGTTTTGTCTTTCGTTCTTGGCCACGTCCTACGTCGCAAGCGGATATATGTTATACCTGAAGCAAGCGCTTCTCTTCTTATAGGTTTAATTGTTGGTGTACTTGCTAACGTTTCAGACACAGAAACTAGTATCAGGGCGTGGTTCAATTTTCATGAGGAATTTTTCTTCCTGTTCCTGTTGCCTCCCATTATATTTCAGTCCGGTTTCAGTCTATCACCTAAACCTTTCTTCTCAAATTTTGGAGCAATTGTGACATTTGCTATATTTGGTACCTTTATTGCTTCAGTAGTCACTGGTGTTTTAGTTTATCTTGGTGGTTTACTCTACCTCATGTATAAACTTCCTTTTGTGGAGTGCCTAATGTTTGGTGCTTTGATATCAGCAACGGATCCTGTTACTGTTCTGTCCATATTTCAGGAACTTGGCACAGATGTCAACCTATATGCCCTGGTGTTTGGAGAATCTGTCCTGAATGATGCAATAGCAATTTCCTTGTACAGGACTATGTCATCTGTCAAAACTAACCACTCTGGACAAAATTTCTTCATGGTGGTTGTGAGATTTTTGGAGACCTTTGTTGGTTCGATGTCTTCAGGTGTTGGGGTTGGATTTACATCTGCTTTGCTTTTTAAGTATGCAGGATTGGATATTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCATATTTCTCGTACATGCTTGCAGAAGGTCTTGGCTTGTCTGGTATTGTATCAATACTGTTCACGGGAATAGTCATGAAGCATTACACATACTCCAATTTGTCAGAAAGTTCTCAAAGATTTGTCTCCGCATTTTTCCATCTAATATCATCACTGGCAGAAACATTTATATTCATATACATGGGGTTCGATATTGCTATGGAACAACATAGCTGGTCGCATGTTGGATTTATATTCTTTTCCATTATATTTATTGGGGTTGCAAGGGCAGCAAATGTCTTTTCTTGTGCTTATTTGGTTAATTTAGTCAGACCTGCAAATAGAAAGATACCTCCAAAACATCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCATTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGGCAGACCATATTCACTGCAACTACAGCTATAGTTGTTTTAACGGTATTACTGATTGGTGGTTCAACGGGAACCATGCTGGAAGCCCTAGAAGTTGTTGGTGACAGCCATAACATTGACAATGCTTTGAGTCCAGTAGGAAACATCAATAATTTTGAAGGAAACCATGGTTATATTGCTCCTTCGTATGATGAAGAATCTTCATCGGGCAACAAAATCAAAATGAAATTGAAAGAGTTTCATCGGAGTGCTGCGTCTTTTACAGCTTTAGATAAAAATTACCTCACCCCATTCTTTACAAGTCAAAATGGAGATGAAGATGATGAAGAAGAGCCTCTTACTACAAGAAGAAGCTTTCAGGGCAATGATCATTACTATAGTGATTCTCGCTGA 1617 0.4026 MGVENDISPADAHGAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKRIYVIPEASASLLIGLIVGVLANVSDTETSIRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAIFGTFIASVVTGVLVYLGGLLYLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAIAISLYRTMSSVKTNHSGQNFFMVVVRFLETFVGSMSSGVGVGFTSALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYTYSNLSESSQRFVSAFFHLISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSIIFIGVARAANVFSCAYLVNLVRPANRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALEVVGDSHNIDNALSPVGNINNFEGNHGYIAPSYDEESSSGNKIKMKLKEFHRSAASFTALDKNYLTPFFTSQNGDEDDEEEPLTTRRSFQGNDHYYSDSR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5545g00003 538 Gene3D - 150 202 - -
Pral5545g00003 538 NCBIfam sodium/hydrogen exchanger 3 32 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5545g00003 538 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5545g00003 538 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5545g00003 538 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5545g00003 538 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5545g00003 538 PANTHER SODIUM/HYDROGEN EXCHANGER 13 521 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pral5545g00003 538 MobiDBLite consensus disorder prediction 506 538 - -
Pral5545g00003 538 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5545g00003 Pral-Chr5545 56244 65526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5545g00003 31 520 Antiporters AT5G55470 31.619 5.36e-55 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5545g00003 K14724 - gmx:100790830 850.892