Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5538g00012 ATGTCCGTCAATCAATCAAGGTCCGATAAGAGCGACAATCATTACCGTAAATCCGGGCGATCAGGGAGCTTCCATCAGCAGCGAGGTTCCTCAGGCACGTACGTTAAGGGCGGTGGCGGCGGGCCCGCGCCTTCTCCCGGGATCACTTCGGGTTCCTCACAGCCCTCTAATCGGAGTTTTAAGAGGTCTAATAATCCACATGGTGGGCAATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATAGTGCTTCTACAGGCCGGACGATACCAAATGGCGCTCATTTACAACAATCACCTGGAGCCTCTGATGCGCCAGGTACAAATGCAGCTGCCAAGTCATCTGAAGCCTCATCTGTACAGAAGAGCTTCAGAGTTGTTCCAAAGGCTCCAGCTCCTCGACCTACCACCATAAATTCTGATACAGCAGCTCCTACAACCCCTACCAAGGCCCCTGGAGATTCATCCAAGCCATTTGCTTTTCAATTTGGGTCCATTAGCCCCGGTTTCATGAATGGGATTTCAGTTCCTGCACGCACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGGCCAGGCTCGTCATGATTCTTTTAGATCTGCACCTTCAGCGCCAACACCTCCACAACAGCTACCACCACGGAATGATGGTGGTGTTACTGACCAATGTAATGCTGGGGAAGCTCATTCAGTGAACAAGGTGAAAAAGGAGGAGCAGGCATCAGCTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTGCCATGACTGGGATTTCAACAGCAATGCCATATCATCACCAATCACAGGCACCTGTACAGTTTGGTGGTCCTAACCCACAGATTCTATCTCAGGGAATGTCAGCAGCATCTCTTCAGATGCCTATACCAATGCATTTACCTATGGGAAATGTTGCACAAGTACAACAACAGGTTTTTGTTCCAGGTCTTCAACCTCTGCCTATTCATCCACAGGGAATTATGCATCAAGGCCAAAACTTAAGTTTCAGTTCTCAAATGAGTCCTCAATTGCCCCATCAGTTAGGTAGCATGGGTGTTAACCTGAACCCACAATATCCCATGCAGCAAGGTGGAAAATTTGCTGGTCCCCGCAAAACTACCACTGTCAAGATTACTCATCCTGAGACACATGAAGAGCTGAGGCTGGATTTTGAGAAAAAGGAAGATTCACATTCAGATGGCACCTCATCAAGTGTCAGGTCTTATCCTAGTATTCCTTCTCAGCCTCAACCTGTTCAGTCATTTGCCACTTCTCATCCCTTAAACTATTATCCATCTAGCACTTACAGTAGCAGCTCTCTTTATTTTCCACCTACTTCTGTTCCTTTACCAAGCAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAATTATCCAGTCAATCCAGGCCCCCAAAATGCAGGTTTTAACAATCAATTATCTATTGGTTCCTTTCCTGTTAATAAAACTGGTGCTTCTGTTCATGGCCTCGGGGAAACACCAAATCTGGAACATTCTCGTGGCGTGCAGAAAGGGATTTCATCAACTATATCTGGACTAACTCATGCTGGCATCAAACCAAGTGGGACCTCTGGTGTTAAAGCAAGTGAATCTCCTAGCTCTTTAGGGGCATCTATTGATGTTGGCTTGACTCAGAAAGGGTCTGATAATTGTTCTGAGACATTGTTACATCAGTCTAAATCATCTAGCGATTCTTTTGCTGCAAGGTCATTGCCAAAACAACCTGCTGCAGGGCCTGCTGAGAAGCTGGCATCTACTCCCTTGATGCCTTCTCCAGCTTCTTTGAGTGACAATTCTGCCTCAGATTTGTCCAACAATGAAGGAAGAAGGAATGAATCTCTTAGCAGGTCAAACTCTATGAAAGATAATCAAAAGAAAACAGGGAGGAGAGGGGAATCTTCGCATCAGGTTCCTGTGCTATCTCCTGCTGTGGTTAGTGTACCTTCTCAATCTGTTGATAGTGCTATGCCTGATCGTGAAATTTCTGATACTGTGGGAAATAAAACAAAGCCTTGTGCAGCAATAACCACTGAAGATATCTCTAGCACACCAGAGGCGTTATCAGTTACAGCTAACAGTGGTATTGTTCCTGATGCCAATGAAATGAACATTGACCCTTCTGCTGAAAATTTTGTTTGCATTCCAGCTGAAGGAGTTGGTGCTTCAGCTGTTGATGGCTTGGAAAATCATGAGCATGAGAAGCTAGAGGAATCATCACAGCAGGATAAACCGGAAAAGATGGATGTTTTTGAAATGGGTAATAAAAATGATGGATCTGAAGTATTTAAACAAAAAGGTGATGGTGATGGGATGAAATTTGAAGAAAGAAAACAAGGCGCAGCAAAGGAATTGCAAGATGTACAACAGAGACCGGAATTGCAGGATGAATCTACAGATTGTAGATCAGCATGTGAGATGACAAGCGATAGTTTAGGTGTGTCTACCGCAGATGATTTGGATTCTAGAGATATCTCTTTAAATAGAAATGATAGTACAGTTAGTAATGAATCTATTTCTGCATCTGATAACAAGGATTGTTCAGAGAATGCTGAGAGTGGCTCAGTTTCCCTTCCAACATCATTTAACAAGGATAGACCTATTTTGGAGCCAAACAAGGTGAAAACTATAGCCAAAGGAAAGAAGAAAAGAAAGGAGACCCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGAGACCTGAGGAAAAGAAAGAAGTTGTGAGTACAGAGAGCAAAGAAATTACTTCTCCGAGAAGGTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTATTGCAACTGTGAAAGATGGACATGACAATGCTGAGCCTGATGACTGGGAGGATGCTGCTGACATGTCTTCCCCAAAATTAGAAGTTGTGGGTACAACTCAACAGGTCAGTGATGGGAGTGAACTTACAGCGAAAAAATACTCCAGAGATTTCCTTTTGAAATTTGAAGAGCAATATGTTGATCTTCCTGAGGGCTTTGAAATTACAGCAGACATTGCTGAGGCTCTGATGAATTCAAATGTTACTGGTTCTCATGTTGAACGTGACTCACATCTTAGTCCAGGAAGAATTATGGATAGGTCTGGTGGGATGTCTCGAATGGACCGACACGGGTCTGGGCGTTTTGAAGAAGACCGGTGGGGTAAAATCCCTGGACCTTTTAATTCAGGACGTGACATTCGTATGGATGGCTTTGGAGGTAATGCTGGATTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCCCGTGCGCAGGCACCTCTGCAGTATGCTGGAGGAATCCTTTCTGGACCGATGCAGTCAATGGGAAATCAGGGAGTTACGCAAAAGAATAGCCCTGATGGTGAGAGGTGGCAACGAGCAACTAACTTCCAGCAGAGGGGTTTAATTCCGTCTCCTCAAACCCCACTTCAGGTGATGCACAAGGCTGAGAGAAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGCAAAGCAGAGGCAGTTGAAGGCCATTCTGAACAAGTTAACTCCTCAGAATTTTGATAGACTTTTTGAGCAGGTTAAAGCGGTGAATATTGACAATACTGACACGCTTAATGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCAACCTTCTGTGAAATGTATGCCAATTTCTGCCTACATCTAGCTGCTGTGTTGCCAGATTTTGGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGAATGATGAGGGTGAGGTCAAGCAGTCTGCTGAAGAGAGGGAAGAGAAACGAATTAAGGCAAGAAGGCGCATGTTAGGTAATATAAGATTGATTGGAGAATTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGATCGTATGAGGACCCTGATGAGGAAGATATTGAGGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATAATTGATCATCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGATATTGTTATCAAAGAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAAGGATGCTATTGATTTGAGAAAGAATAGATGGCAACAGAAACGGAAAGTTGAGGGTCCGAAAAAGATTGAGGAGGTTCACAGGGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAGGACGCGGTCCAGGCAATGCTGCATCATCAAGAAGGATGCCTATGGATTTTAGTCCAAGAGGGTCGTCTATGTTTTCTCCTACTAACACCCCTATGGGGCTGCGTGCGCCACAGGTTCGCAGTGGTGGTTCTCAGGATGTTCGTCAAGACAATAGACTATCATATGAGGCTAGAAATTTGTCTGTTACTTTGCCTCAAAGACCTTTAGGTGATGATTCAATAACCTTGGGACCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGCTGTGATTCCAAGTTCTGTTCCTGATTTGCACCCAGGTGCAGATTCTCGAAGAATGACATCTGTTCTGAATGGTCATGGCAATTCATCAGAGCGTACTCTGTATAGCAGTAGAGAAGATCAAATGACAAGACATGGACCAGATAGATTTGCTGGTCCAACTGCTCATGACCAATCAGCTGTTCAGGAGCGTAATATTAATTATGGTAATAGGGAGTCGAGAAATGCAGACCGGAGTCAAGAGAGACCAGTTGCAACTTTAACTCCTGGAGTTCAAGGATCTGCTGTCTCTGAGAATGTGTCGTTGGAGAAGGTTTTGCCAGCAGAACGATTGCAGGACATGTCCATGGCGGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCAGTGTGTCAAAGATTTAAAGTCTCCCAGCTATCATCCTTCGATGATTTCTTTATGGGTCACGGACTCCTTTGAGAGAAAGGACACGGAAAGAGATCTTTTGGCCAAATTACTAGTGAGCCTTACAAAGTCTCAGGATGGCACCTTGAGTCAGGCTCAGCTTATCCAAGGATTCGAATCTGTTCTAAGTGATCTGGAAGATGCCGTTAATGATGCCCCGAGAGCCCCTGAATTTCTAGGCCGAATTTTTGCCAGAGTTGTGATGGAAAACGTTGTCTCTTTGAAAGAGATCGGCCAACTACTATCACGTGAAGGCGGAGAGGAGCAAGGCCAGCTCTTAGAAATTCAACTCGCAGCCGATGTTCTTGGAAGCACATTGGAAGCAATAAAAGTGGAGAAGGGAGACGCTGTCTTGAGTGAGATTCGGTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGCCACCCCATCCCATTATATCAAGGAAGTTGGAAAGTTTTATTTAG 5490 0.4441 MSVNQSRSDKSDNHYRKSGRSGSFHQQRGSSGTYVKGGGGGPAPSPGITSGSSQPSNRSFKRSNNPHGGQSRVNPPPVNSAESNSASTGRTIPNGAHLQQSPGASDAPGTNAAAKSSEASSVQKSFRVVPKAPAPRPTTINSDTAAPTTPTKAPGDSSKPFAFQFGSISPGFMNGISVPARTSSAPPNLDEQKRGQARHDSFRSAPSAPTPPQQLPPRNDGGVTDQCNAGEAHSVNKVKKEEQASALPPSSQVQKPSVAMTGISTAMPYHHQSQAPVQFGGPNPQILSQGMSAASLQMPIPMHLPMGNVAQVQQQVFVPGLQPLPIHPQGIMHQGQNLSFSSQMSPQLPHQLGSMGVNLNPQYPMQQGGKFAGPRKTTTVKITHPETHEELRLDFEKKEDSHSDGTSSSVRSYPSIPSQPQPVQSFATSHPLNYYPSSTYSSSSLYFPPTSVPLPSSHITPNSQQPRFNYPVNPGPQNAGFNNQLSIGSFPVNKTGASVHGLGETPNLEHSRGVQKGISSTISGLTHAGIKPSGTSGVKASESPSSLGASIDVGLTQKGSDNCSETLLHQSKSSSDSFAARSLPKQPAAGPAEKLASTPLMPSPASLSDNSASDLSNNEGRRNESLSRSNSMKDNQKKTGRRGESSHQVPVLSPAVVSVPSQSVDSAMPDREISDTVGNKTKPCAAITTEDISSTPEALSVTANSGIVPDANEMNIDPSAENFVCIPAEGVGASAVDGLENHEHEKLEESSQQDKPEKMDVFEMGNKNDGSEVFKQKGDGDGMKFEERKQGAAKELQDVQQRPELQDESTDCRSACEMTSDSLGVSTADDLDSRDISLNRNDSTVSNESISASDNKDCSENAESGSVSLPTSFNKDRPILEPNKVKTIAKGKKKRKETLQKADAAGSTSDLYNAYKRPEEKKEVVSTESKEITSPRRLKQLPNEAAQSDAIATVKDGHDNAEPDDWEDAADMSSPKLEVVGTTQQVSDGSELTAKKYSRDFLLKFEEQYVDLPEGFEITADIAEALMNSNVTGSHVERDSHLSPGRIMDRSGGMSRMDRHGSGRFEEDRWGKIPGPFNSGRDIRMDGFGGNAGFRPGQGGNFGVLRNPRAQAPLQYAGGILSGPMQSMGNQGVTQKNSPDGERWQRATNFQQRGLIPSPQTPLQVMHKAERKYEVGKVTDEEQAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNTDTLNGVISQIFEKALMEPTFCEMYANFCLHLAAVLPDFGEDNEKITFKRLLLNKCQEEFERGEREQEEANKNDEGEVKQSAEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYEDPDEEDIEALCKLMSTIGEIIDHPKAKEHMDAYFERMILLSKNMNLSSRVRFMLKDAIDLRKNRWQQKRKVEGPKKIEEVHRDAAQERQAQTGRLGRGPGNAASSRRMPMDFSPRGSSMFSPTNTPMGLRAPQVRSGGSQDVRQDNRLSYEARNLSVTLPQRPLGDDSITLGPQGGLARGMSFRGPAVIPSSVPDLHPGADSRRMTSVLNGHGNSSERTLYSSREDQMTRHGPDRFAGPTAHDQSAVQERNINYGNRESRNADRSQERPVATLTPGVQGSAVSENVSLEKVLPAERLQDMSMAAIKEYYSARDVKEVAQCVKDLKSPSYHPSMISLWVTDSFERKDTERDLLAKLLVSLTKSQDGTLSQAQLIQGFESVLSDLEDAVNDAPRAPEFLGRIFARVVMENVVSLKEIGQLLSREGGEEQGQLLEIQLAADVLGSTLEAIKVEKGDAVLSEIRSNSNLRLETFRPPHPIISRKLESFI 1829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 406 429 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1532 1619 - -
Pral5538g00012 1829 Gene3D - 1186 1421 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 651 669 - -
Pral5538g00012 1829 SMART if4_15 1186 1408 IPR003890 GO:0003723|GO:0005515
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 137 155 - -
Pral5538g00012 1829 ProSiteProfiles MI domain profile. 1640 1764 IPR003891 -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 524 678 - -
Pral5538g00012 1829 Coils Coil 1268 1300 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1052 1071 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 601 633 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 812 827 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 46 124 - -
Pral5538g00012 1829 SUPERFAMILY ARM repeat 1636 1825 IPR016024 -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 176 190 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 524 581 - -
Pral5538g00012 1829 SMART ma3_7 1641 1755 IPR003891 -
Pral5538g00012 1829 FunFam Eukaryotic translation initiation factor 4G 1634 1828 - -
Pral5538g00012 1829 FunFam Eukaryotic translation initiation factor 4G 1186 1421 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 914 937 - -
Pral5538g00012 1829 Pfam MA3 domain 1647 1753 IPR003891 -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 838 873 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1413 1432 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 385 405 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1413 1486 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1551 1566 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 385 429 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1277 1302 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1035 1078 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 740 969 - -
Pral5538g00012 1829 Pfam MIF4G domain 1186 1407 IPR003890 GO:0003723|GO:0005515
Pral5538g00012 1829 Gene3D - 1634 1829 - -
Pral5538g00012 1829 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 357 1828 IPR045208 GO:0003743
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1 257 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 740 811 - -
Pral5538g00012 1829 MobiDBLite consensus disorder prediction 1460 1474 - -
Pral5538g00012 1829 SUPERFAMILY ARM repeat 1180 1410 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5538g00012 Pral-Chr5538 170038 178617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5538g00012 1 1828 Eukaryotic Initiation Factors Gene Family AT3G60240 44.789 0.0 1259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5538g00012 K03260 - gmx:100796636 2133.22