Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5538g00011 ATGTCCGTCAATCAATCAAGGTCCGATAAGAGCGACAATCATTACCGTAAATCCGGGCGATCAGGGAGCTTCCATCAGCAGCGAGGTTCCTCAGGCACGTACGTTAAGGGCGGTGGCGGCGGGCCCGCGCCTTCTCCCGGGATCACTTCGGGTTCCTCACAGCCCTCTAATCGGAGGGTAAACCCTCCCCCTGTGAATTCAGCCGAGTCTAATAGTGCTTCTACAGGCCGGACGATACCAAATGGCGCTCATTTACAACAATCACCTGGAGCCTCTGATGCGCCAGGTACAAATGCAGCTGCCAAGTCATCTGAAGCCTCATCTGTACAGAAGAGCTTCAGAGTTGTTCCAAAGGCTCCAGCTCCTCGACCTACCACCATAAATTCTGATACAGCAGCTCCTACAACCCCTACCAAGGCCCCTGGAGATTCATCCAAGCCATTTGCTTTTCAATTTGGGTCCATTAGCCCCGGTTTCATGAATGGGATTTCAGTTCCTGCACGCACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGGCCAGGCTCGTCATGATTCTTTTAGATCTGCACCTTCAGCGCCAACACCTCCACAACAGCTACCACCACGGAATGATGGTGGTGTTACTGACCAATGTAATGCTGGGGAAGCTCATTCAGTGAACAAGGTGAAAAAGGAGGAGCAGGCATCAGCTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTGCCATGACTGGGATTTCAACAGCAATGCCATATCATCACCAATCACAGGCACCTGTACAGTTTGGTGGTCCTAACCCACAGATTCTATCTCAGGGAATGTCAGCAGCATCTCTTCAGATGCCTATACCAATGCATTTACCTATGGGAAATGTTGCACAAGTACAACAACAGGTTTTTGTTCCAGGTCTTCAACCTCTGCCTATTCATCCACAGGGAATTATGCATCAAGGCCAAAACTTAAGTTTCAGTTCTCAAATGAGTCCTCAATTGCCCCATCAGTTAGGTAGCATGGGTGTTAACCTGAACCCACAATATCCCATGCAGCAAGGTGGAAAATTTGCTGGTCCCCGCAAAACTACCACTGTCAAGATTACTCATCCTGAGACACATGAAGAGCTGAGGCTGGATTTTGAGAAAAAGGAAGATTCACATTCAGATGGCACCTCATCAAGTGTCAGGTCTTATCCTAGTATTCCTTCTCAGCCTCAACCTGTTCAGTCATTTGCCACTTCTCATCCCTTAAACTATTATCCATCTAGCACTTACAGTAGCAGCTCTCTTTATTTTCCACCTACTTCTGTTCCTTTACCAAGCAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAATTATCCAGTCAATCCAGGCCCCCAAAATGCAGGTTTTAACAATCAATTATCTATTGGTTCCTTTCCTGTTAATAAAACTGGTGCTTCTGTTCATGGCCTCGGGGAAACACCAAATCTGGAACATTCTCGTGGCGTGCAGAAAGGGATTTCATCAACTATATCTGGACTAACTCATGCTGGCATCAAACCAAGTGGGACCTCTGGTGTTAAAGCAAGTGAATCTCCTAGCTCTTTAGGGGCATCTATTGATGTTGGCTTGACTCAGAAAGGGTCTGATAATTGTTCTGAGACATTGTTACATCAGTCTAAATCATCTAGCGATTCTTTTGCTGCAAGGTCATTGCCAAAACAACCTGCTGCAGGGCCTGCTGAGAAGCTGGCATCTACTCCCTTGATGCCTTCTCCAGCTTCTTTGAGTGACAATTCTGCCTCAGATTTGTCCAACAATGAAGGAAGAAGGAATGAATCTCTTAGCAGGTCAAACTCTATGAAAGATAATCAAAAGAAAACAGGGAGGAGAGGGGAATCTTCGCATCAGGTTCCTGTGCTATCTCCTGCTGTGGTTAGTGTACCTTCTCAATCTGTTGATAGTGCTATGCCTGATCGTGAAATTTCTGATACTGTGGGAAATAAAACAAAGCCTTGTGCAGCAATAACCACTGAAGATATCTCTAGCACACCAGAGGCGTTATCAGTTACAGCTAACAGTGGTATTGTTCCTGATGCCAATGAAATGAACATTGACCCTTCTGCTGAAAATTTTGTTTGCATTCCAGCTGAAGGAGTTGGTGCTTCAGCTGTTGATGGCTTGGAAAATCATGAGCATGAGAAGCTAGAGGAATCATCACAGCAGGATAAACCGGAAAAGATGGATGTTTTTGAAATGGGTAATAAAAATGATGGATCTGAAGTATTTAAACAAAAAGGTGATGGTGATGGGATGAAATTTGAAGAAAGAAAACAAGGCGCAGCAAAGGAATTGCAAGATGTACAACAGAGACCGGAATTGCAGGATGAATCTACAGATTGTAGATCAGCATGTGAGATGACAAGCGATAGTTTAGGTGTGTCTACCGCAGATGATTTGGATTCTAGAGATATCTCTTTAAATAGAAATGATAGTACAGTTAGTAATGAATCTATTTCTGCATCTGATAACAAGGATTGTTCAGAGAATGCTGAGAGTGGCTCAGTTTCCCTTCCAACATCATTTAACAAGGATAGACCTATTTTGGAGCCAAACAAGGTGAAAACTATAGCCAAAGGAAAGAAGAAAAGAAAGGAGACCCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGAGACCTGAGGAAAAGAAAGAAGTTGTGAGTACAGAGAGCAAAGAAATTACTTCTCCGAGAAGGTTAAAGCAGTTGCCTAATGAGGCTGCTCAATCAGATGCTATTGCAACTGTGAAAGATGGACATGACAATGCTGAGCCTGATGACTGGGAGGATGCTGCTGACATGTCTTCCCCAAAATTAGAAGTTGTGGGTACAACTCAACAGGTCAGTGATGGGAGTGAACTTACAGCGAAAAAATACTCCAGAGATTTCCTTTTGAAATTTGAAGAGCAATATGTTGATCTTCCTGAGGGCTTTGAAATTACAGCAGACATTGCTGAGGCTCTGATGAATTCAAATGTTACTGGTTCTCATGTTGAACGTGACTCACATCTTAGTCCAGGAAGAATTATGGATAGGTCTGGTGGGATGTCTCGAATGGACCGACACGGGTCTGGGCGTTTTGAAGAAGACCGGTGGGGTAAAATCCCTGGACCTTTTAATTCAGGACGTGACATTCGTATGGATGGCTTTGGAGGTAATGCTGGATTTCGACCTGGTCAAGGAGGCAATTTTGGTGTTTTGAGGAACCCCCGTGCGCAGGCACCTCTGCAGTATGCTGGAGGAATCCTTTCTGGACCGATGCAGTCAATGGGAAATCAGGGAGTTACGCAAAAGAATAGCCCTGATGGTGAGAGGTGGCAACGAGCAACTAACTTCCAGCAGAGGGGTTTAATTCCGTCTCCTCAAACCCCACTTCAGGTGATGCACAAGGCTGAGAGAAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGCAAAGCAGAGGCAGTTGAAGGCCATTCTGAACAAGTTAACTCCTCAGAATTTTGATAGACTTTTTGAGCAGGTTAAAGCGGTGAATATTGACAATACTGACACGCTTAATGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCAACCTTCTGTGAAATGTATGCCAATTTCTGCCTACATCTAGCTGCTGTGTTGCCAGATTTTGGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGAATGATGAGGGTGAGGTCAAGCAGTCTGCTGAAGAGAGGGAAGAGAAACGAATTAAGGCAAGAAGGCGCATGTTAGGTAATATAAGATTGATTGGAGAATTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGAGTGCATCAAGAAGTTACTGGGATCGTATGAGGACCCTGATGAGGAAGATATTGAGGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATAATTGATCATCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGATATTGTTATCAAAGAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAAGGATGCTATTGATTTGAGAAAGAATAGATGGCAACAGAAACGGAAAGTTGAGGGTCCGAAAAAGATTGAGGAGGTTCACAGGGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAGGACGCGGTCCAGGCAATGCTGCATCATCAAGAAGGATGCCTATGGATTTTAGTCCAAGAGGGTCGTCTATGTTTTCTCCTACTAACACCCCTATGGGGCTGCGTGCGCCACAGGTTCGCAGTGGTGGTTCTCAGGATGTTCGTCAAGACAATAGACTATCATATGAGGCTAGAAATTTGTCTGTTACTTTGCCTCAAAGACCTTTAGGTGATGATTCAATAACCTTGGGACCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGCTGTGATTCCAAGTTCTGTTCCTGATTTGCACCCAGGTGCAGATTCTCGAAGAATGACATCTGTTCTGAATGGTCATGGCAATTCATCAGAGCGTACTCTGTATAGCAGTAGAGAAGATCAAATGACAAGACATGGACCAGATAGATTTGCTGGTCCAACTGCTCATGACCAATCAGCTGTTCAGGAGCGTAATATTAATTATGGTAATAGGGAGTCGAGAAATGCAGACCGGAGTCAAGAGAGACCAGTTGCAACTTTAACTCCTGGAGTTCAAGGATCTGCTGTCTCTGAGAATGTGTCGTTGGAGAAGGTTTTGCCAGCAGAACGATTGCAGGACATGTCCATGGCGGCAATTAAAGAATACTACAGTGCTAGAGATGTAAAAGAAGTTGCGCAGTGTGTCAAAGATTTAAAGTCTCCCAGCTATCATCCTTCGATGATTTCTTTATGGGTCACGGACTCCTTTGAGAGAAAGGACACGGAAAGAGATCTTTTGGCCAAATTACTAGTGAGCCTTACAAAGTCTCAGGATGGCACCTTGAGTCAGGCTCAGCTTATCCAAGGATTCGAATCTGTTCTAAGTGATCTGGAAGATGCCGTTAATGATGCCCCGAGAGCCCCTGAATTTCTAGGCCGAATTTTTGCCAGAGTTGTGATGGAAAACGTTGTCTCTTTGAAAGAGATCGGCCAACTACTATCACGTGAAGGCGGAGAGGAGCAAGGCCAGCTCTTAGAAATTCAACTCGCAGCCGATGTTCTTGGAAGCACATTGGAAGCAATAAAAGTGGAGAAGGGAGACGCTGTCTTGAGTGAGATTCGGTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGCCACCCCATCCCATTATATCAAGGAAGTTGGAAAGTTTTATTTAG 5451 0.4445 MSVNQSRSDKSDNHYRKSGRSGSFHQQRGSSGTYVKGGGGGPAPSPGITSGSSQPSNRRVNPPPVNSAESNSASTGRTIPNGAHLQQSPGASDAPGTNAAAKSSEASSVQKSFRVVPKAPAPRPTTINSDTAAPTTPTKAPGDSSKPFAFQFGSISPGFMNGISVPARTSSAPPNLDEQKRGQARHDSFRSAPSAPTPPQQLPPRNDGGVTDQCNAGEAHSVNKVKKEEQASALPPSSQVQKPSVAMTGISTAMPYHHQSQAPVQFGGPNPQILSQGMSAASLQMPIPMHLPMGNVAQVQQQVFVPGLQPLPIHPQGIMHQGQNLSFSSQMSPQLPHQLGSMGVNLNPQYPMQQGGKFAGPRKTTTVKITHPETHEELRLDFEKKEDSHSDGTSSSVRSYPSIPSQPQPVQSFATSHPLNYYPSSTYSSSSLYFPPTSVPLPSSHITPNSQQPRFNYPVNPGPQNAGFNNQLSIGSFPVNKTGASVHGLGETPNLEHSRGVQKGISSTISGLTHAGIKPSGTSGVKASESPSSLGASIDVGLTQKGSDNCSETLLHQSKSSSDSFAARSLPKQPAAGPAEKLASTPLMPSPASLSDNSASDLSNNEGRRNESLSRSNSMKDNQKKTGRRGESSHQVPVLSPAVVSVPSQSVDSAMPDREISDTVGNKTKPCAAITTEDISSTPEALSVTANSGIVPDANEMNIDPSAENFVCIPAEGVGASAVDGLENHEHEKLEESSQQDKPEKMDVFEMGNKNDGSEVFKQKGDGDGMKFEERKQGAAKELQDVQQRPELQDESTDCRSACEMTSDSLGVSTADDLDSRDISLNRNDSTVSNESISASDNKDCSENAESGSVSLPTSFNKDRPILEPNKVKTIAKGKKKRKETLQKADAAGSTSDLYNAYKRPEEKKEVVSTESKEITSPRRLKQLPNEAAQSDAIATVKDGHDNAEPDDWEDAADMSSPKLEVVGTTQQVSDGSELTAKKYSRDFLLKFEEQYVDLPEGFEITADIAEALMNSNVTGSHVERDSHLSPGRIMDRSGGMSRMDRHGSGRFEEDRWGKIPGPFNSGRDIRMDGFGGNAGFRPGQGGNFGVLRNPRAQAPLQYAGGILSGPMQSMGNQGVTQKNSPDGERWQRATNFQQRGLIPSPQTPLQVMHKAERKYEVGKVTDEEQAKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNTDTLNGVISQIFEKALMEPTFCEMYANFCLHLAAVLPDFGEDNEKITFKRLLLNKCQEEFERGEREQEEANKNDEGEVKQSAEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYEDPDEEDIEALCKLMSTIGEIIDHPKAKEHMDAYFERMILLSKNMNLSSRVRFMLKDAIDLRKNRWQQKRKVEGPKKIEEVHRDAAQERQAQTGRLGRGPGNAASSRRMPMDFSPRGSSMFSPTNTPMGLRAPQVRSGGSQDVRQDNRLSYEARNLSVTLPQRPLGDDSITLGPQGGLARGMSFRGPAVIPSSVPDLHPGADSRRMTSVLNGHGNSSERTLYSSREDQMTRHGPDRFAGPTAHDQSAVQERNINYGNRESRNADRSQERPVATLTPGVQGSAVSENVSLEKVLPAERLQDMSMAAIKEYYSARDVKEVAQCVKDLKSPSYHPSMISLWVTDSFERKDTERDLLAKLLVSLTKSQDGTLSQAQLIQGFESVLSDLEDAVNDAPRAPEFLGRIFARVVMENVVSLKEIGQLLSREGGEEQGQLLEIQLAADVLGSTLEAIKVEKGDAVLSEIRSNSNLRLETFRPPHPIISRKLESFI 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1039 1058 - -
Pral5538g00011 1816 SMART if4_15 1173 1395 IPR003890 GO:0003723|GO:0005515
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 799 814 - -
Pral5538g00011 1816 Gene3D - 1173 1408 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 901 924 - -
Pral5538g00011 1816 SUPERFAMILY ARM repeat 1623 1812 IPR016024 -
Pral5538g00011 1816 Pfam MA3 domain 1634 1740 IPR003891 -
Pral5538g00011 1816 Pfam MIF4G domain 1173 1394 IPR003890 GO:0003723|GO:0005515
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 638 656 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 511 665 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 124 142 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 588 620 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 825 860 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1400 1419 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 393 416 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1538 1553 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1400 1473 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 163 177 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 511 568 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1 244 - -
Pral5538g00011 1816 FunFam Eukaryotic translation initiation factor 4G 1621 1815 - -
Pral5538g00011 1816 FunFam Eukaryotic translation initiation factor 4G 1173 1408 - -
Pral5538g00011 1816 Gene3D - 1621 1816 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1264 1289 - -
Pral5538g00011 1816 SUPERFAMILY ARM repeat 1167 1397 IPR016024 -
Pral5538g00011 1816 SMART ma3_7 1628 1742 IPR003891 -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 373 392 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 726 956 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1447 1461 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 726 798 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 46 111 - -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1519 1606 - -
Pral5538g00011 1816 ProSiteProfiles MI domain profile. 1627 1751 IPR003891 -
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 373 416 - -
Pral5538g00011 1816 Coils Coil 1255 1287 - -
Pral5538g00011 1816 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 344 1815 IPR045208 GO:0003743
Pral5538g00011 1816 MobiDBLite consensus disorder prediction 1022 1065 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5538g00011 Pral-Chr5538 170037 178314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5538g00011 1 1815 Eukaryotic Initiation Factors Gene Family AT3G60240 44.450 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5538g00011 K03260 - gmx:100796636 2112.81