Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5538g00009 ATGGCTGGAAAGGAAGAGGTGAAGCTGTTGGGAATCGTAGGAAGCCCATTTGTGAGTCGAGCAGAGATTGCTCTGAAACTGAAGGGAGTGGAATTTGAATATGTTCATGAATCTGTGGGCAAGAAAAGCGATCTTCTTCTTAAGTACAACCCAGTTCACAAGTTGGTTCCTGTGCTTATTCACAATGAGAAATCTGTGTGTGAGTCGCTTGTGATTGTTGAATACATCGATGAGACTTGGAATAAAGGTCATGATCCCTTCTTGCCTTCTGATCCTCATCACAGAGCCTTGGCTCGTTTCTGGGCTAAGTTCATCGATGACAAGGTTATGCCTGGAGTATTTAAAGCAGCCTGGAACCCTAATGAGAAAGAAAGAGAGAAGGGTGTTGAAGAATCATTGGATGCTTTGGAGGTTCTAGAAAAGGAGCTGAAAGGCAAGTTCTTCGGTGGAGATTCAGTTGGGCTTGTGGATATTGCTGGTTTGTTTGTGGCTTATTGGTTGCCCGTAGTTCAAGAAGCTGGTGGGCTTGATTGGTTCAATGGTGAGAAATTTCCCAAGCTTCAGAAATGGAGTCATGCAATTTTGAATCACCCAACTATTAAGCTGGCTTTACCTCCTAGAGATGATCTTCTTGGCTATGCCAGAGCACAATTTCAAAGCATTGCTGCTTCAAACTAG 678 0.4366 MAGKEEVKLLGIVGSPFVSRAEIALKLKGVEFEYVHESVGKKSDLLLKYNPVHKLVPVLIHNEKSVCESLVIVEYIDETWNKGHDPFLPSDPHHRALARFWAKFIDDKVMPGVFKAAWNPNEKEREKGVEESLDALEVLEKELKGKFFGGDSVGLVDIAGLFVAYWLPVVQEAGGLDWFNGEKFPKLQKWSHAILNHPTIKLALPPRDDLLGYARAQFQSIAASN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5538g00009 225 CDD GST_C_Tau 92 216 IPR045074 GO:0004364|GO:0006749
Pral5538g00009 225 FunFam Tau class glutathione S-transferase 88 224 - -
Pral5538g00009 225 Pfam Glutathione S-transferase, C-terminal domain 106 198 IPR004046 -
Pral5538g00009 225 Gene3D - 91 225 - -
Pral5538g00009 225 Coils Coil 224 225 - -
Pral5538g00009 225 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Pral5538g00009 225 FunFam Glutathione S-transferase GSTU6 2 87 - -
Pral5538g00009 225 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Pral5538g00009 225 SFLD Main (cytGST) 4 223 - -
Pral5538g00009 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Pral5538g00009 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 209 IPR045073 -
Pral5538g00009 225 Gene3D Glutaredoxin 1 90 - -
Pral5538g00009 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 218 IPR010987 -
Pral5538g00009 225 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Pral5538g00009 225 SUPERFAMILY GST C-terminal domain-like 78 219 IPR036282 -
Pral5538g00009 225 CDD GST_N_Tau 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5538g00009 Pral-Chr5538 135856 137136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5538g00009 1 224 Glutathione S-transferase Gene Family AT3G09270 53.540 5.51e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5538g00009 K00799 - gmx:100500680 293.893