Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5535g00013 ATGATAGTCTTCGCCTCATCTCAAACACCAATCAAGAACAAACACTTCTTCAACCTCGCCATGATTACTCACAGATGCTTCTTACTCTTCTTCTTCTTTATCAGTAGCTTCCTCTGTTCTGCTACCATTGAAGCACTACGACCTACTTATCTTTACCACAACTGCTCCACCGCCGGAAAAAGCTTCTCTGCTAATAGTACCTTCCAATCCCACCGGACCACCCTCCTCTCCTCCTTAGCTTCAGCCAATGCCGCCTTCTACAACGCCACCGTTCCTGGAGGCAGTGAAGCCATCTACGGCCTCTTCATGTGCCGGGGCGACGTCTCCCTCCAGGTCTGCCGCGAATGCGTCGCTAACGCAACCCAACTGCTACCTTCTGAGTGCCGGTTTTCGAAGGAGGCCGTAATCTGGTACGACGAGTGCATGCTTCGCTATTCCAACACCTCTTTCTTCTCCACCATTGATAAATGGCCAACCGTCGTCATATTGAACCCGTACAATATCTCCAACTCATACCAGGCAAGATTCAAGAGTTTCTTGCTGGATTTTATGAATGAGACGGCAAGTATGGTAGCGGTGCCGAAATCTGCGTCGGAGGAAAAGGCGTATGCGAAGAACCAAGCTAATTTTCAGTCTCAAACTGTGTACAGTCTAGCTCAGTGCACGCCGGATCTACGGCTTGAAGATTGCAGAAGTTGTTTGAGTGGTGTGATTGGGAACATTCCGTTGTGTAGTGAGGGGAAGATCGGAGGAAGAGCTGTGAATCCCAGCTGCAACATTCGCTATGAAATGTCCCCGCCAGAGGCACCGGCACCGGCACCGGCGCCGGCAGTGTCCCCGGCTCTGACGCCTCCATTTTTCCCTCGAACCAATACTTCACGTCATCCTCGACCTCCAGGAAGGACAATACTTGTAGTTGTGGCTTCTGCTGTTGTTGGAGGAATAATTTTTTATTCGGCTTACTATCTCTTAAAGATTCGAATGAAGAAGAGTCATAGGGCTGGGCTCAGAAAAAAATACTTTGGAACGGAAAGCACTACTTTAGAGCATCTGCAATTCAATTTGGCTACGATTGAGGCTGCGACAAATAGGTTTTCTCATGAAAATAGTTTAGGGCGTGGTGGATTTGGACAAGTTTTTAAGGGTATTCTTTTAAATGGTCAAGAAATAGCGGTGAAGAGACTTTCAAAGGGATCTGGCCAAGGTGCAGAAGAGTTTAAGAACGAGGTTTTATTAATAGCCAGACTCCAACACAGAAATTTGGTGGCTTTGTTAGGATTTTGTATTGAGGAGCAAGAGAAAATACTAGTTTATGAATATGTTCCTAATAGAAGCCTTGATTACTTTTTATTTGGTTCCCAAAACAGCAGGGTATTAGATTGGATGGAGCGTAGTAAAATCATAGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGAATATTCTCGTCTAAAAATCATACATCGAGATCTTAAACCTAGTAATATTTTGTTGGATGATGAAATGAATCCAAAAATTTCAGATTTTGGCCTAGCTAAGATGGTTGCTATTAGTGAAAATGAAGGAAGTACAAATCGAATTGTTGGAACATATGGCTATATGTCTCCAGAATATGCAATGTTCGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATTAGTGGAAAGAAGAATACGGGTTGTCATGATTCACAATATGCCGATGGCCTCTTAAGCTATACTTGGAAGCAGTGGAGGGACGACAAGTTGCTAGAGATACTGGATTCAAATATAAATGAATTGGGATCATACAATGAAGTGATCAAGTGCATTCAAATTGGTTTATTATGTGTTCAAGAAAATCCAAATACAAGGCCTTCCATGGCTACAGTTGTTTCATATCTTAGCAATGATTCTATTCAATTGCCATCACCACAGGAACCTGCTTTCTTTTTGCATGGCAAACCAGAGCCTATTATCACCAGTGCAAGTGGAGAATCATGCTCTGTTAATGAAGCTTCCATGAGTGAATTCTTTCCTCGCTAA 2049 0.4305 MIVFASSQTPIKNKHFFNLAMITHRCFLLFFFFISSFLCSATIEALRPTYLYHNCSTAGKSFSANSTFQSHRTTLLSSLASANAAFYNATVPGGSEAIYGLFMCRGDVSLQVCRECVANATQLLPSECRFSKEAVIWYDECMLRYSNTSFFSTIDKWPTVVILNPYNISNSYQARFKSFLLDFMNETASMVAVPKSASEEKAYAKNQANFQSQTVYSLAQCTPDLRLEDCRSCLSGVIGNIPLCSEGKIGGRAVNPSCNIRYEMSPPEAPAPAPAPAVSPALTPPFFPRTNTSRHPRPPGRTILVVVASAVVGGIIFYSAYYLLKIRMKKSHRAGLRKKYFGTESTTLEHLQFNLATIEAATNRFSHENSLGRGGFGQVFKGILLNGQEIAVKRLSKGSGQGAEEFKNEVLLIARLQHRNLVALLGFCIEEQEKILVYEYVPNRSLDYFLFGSQNSRVLDWMERSKIIGGVARGILYLHEYSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAISENEGSTNRIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISGKKNTGCHDSQYADGLLSYTWKQWRDDKLLEILDSNINELGSYNEVIKCIQIGLLCVQENPNTRPSMATVVSYLSNDSIQLPSPQEPAFFLHGKPEPIITSASGESCSVNEASMSEFFPR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5535g00013 682 Gene3D Phosphorylase Kinase; domain 1 326 440 - -
Pral5535g00013 682 Gene3D - 47 150 IPR038408 -
Pral5535g00013 682 Gene3D - 160 266 IPR038408 -
Pral5535g00013 682 CDD STKc_IRAK 371 636 - -
Pral5535g00013 682 Pfam Protein kinase domain 366 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5535g00013 682 MobiDBLite consensus disorder prediction 269 299 - -
Pral5535g00013 682 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Pral5535g00013 682 FunFam cysteine-rich receptor-like protein kinase 10 441 643 - -
Pral5535g00013 682 ProSiteProfiles Protein kinase domain profile. 365 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5535g00013 682 Pfam Salt stress response/antifungal 55 147 IPR002902 -
Pral5535g00013 682 Pfam Salt stress response/antifungal 170 263 IPR002902 -
Pral5535g00013 682 SMART serkin_6 365 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5535g00013 682 SUPERFAMILY Protein kinase-like (PK-like) 348 664 IPR011009 -
Pral5535g00013 682 ProSiteProfiles Gnk2-homologous domain profile. 156 267 IPR002902 -
Pral5535g00013 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Pral5535g00013 682 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 327 440 - -
Pral5535g00013 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 95 665 - -
Pral5535g00013 682 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 48 149 - -
Pral5535g00013 682 Gene3D Transferase(Phosphotransferase) domain 1 441 644 - -
Pral5535g00013 682 MobiDBLite consensus disorder prediction 269 283 - -
Pral5535g00013 682 FunFam Cysteine-rich receptor-like protein kinase 10 158 266 - -
Pral5535g00013 682 ProSiteProfiles Gnk2-homologous domain profile. 50 150 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5535g00013 Pral-Chr5535 251583 256426 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5535g00013 29 682 Receptor kinase-like Gene Family AT4G05200 44.675 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5535g00013 Pkinase 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5535g00013 - - pcin:129286093 821.231