Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5531g00014 ATGCCTCGGATTTCCTTTCTCTTCTTTCTCCTTTACCTAACAAGCCTAATTTCTCATCATGGCACTATCGCCCAGCAAGACTTCTTAAAGTATGTCTGTGGTGAAGGCCCCGCTAACAGCAATAGTTCCTTCCGATCCAACCTCAGAAACCTTTTACTAAACATGTCTTTCAACACACAAATCGACTATGGTTTCTACAACTTCTCCTCCGGCAACAACGCTAACAAAGTTTATGTCATCGGACTATGCCGAGGAGACATTACTGTACAAGATTGCCGCAGTTGCATCCAAGATTCGAGGGTGATTATTCTCCAAGTATGTTCACCTAATGCGAGGGAAGCGATCGGGTGGTACGACATCTGCTTTCTACGATACTCAAATCGATCGATATTTGGTGTGATGGAAACATCGCCGGGTTACAATTCGTCAGACAGCTCCGACGCTTTGGAGAAAGACGAGTTCAAGAATGTGCTGATGCAGATGATGAGTTATCTGAGAGAAAGAGCTGCTTCCGGAGACTCGCTCCGGAAGTTTGCGGTGGCGAATGCTAGTTGTCCGGGCAATCAAACCATGTACGGTCTTGCACAGTGCACGCCCAACTTGTCGAACAAGGATTGTGACATTTGCCTGAGTGGGGCAATCTCTGATATTTCTAAATGTTGCGACGGAAAGAGAGGTGGTCGGGTGGTCCGACCCAGTTGCTACATTAGATTTGGACCCGATAGCTTCTTTGACGCTTCTGCATACAATAATACACAATCATTTGTGCAATCACCGTTGCCTCATCTTGCCTCCAAACAAGGAAAGAGAAACAAGTCATCAAGGATTGTTATTGCCGTGGTTGTTGCCTTCACCGCAGGACTCACCTTACTCATCTTCATCGTTGTAATATATTTAAAACCAATGAGGACACCCAATAAAATGGAAACTGAAGCTAAGGATGCAGCCGACTCATTGCAAATGGACTTTGAAACCATCAGAATGGCAACAAATGATTTTGCTGATGCAAATAAGCTTGGACAAGGTGGATTTGGAGCCGTTTACTTGGGTAGGTTGTATAATGGACAAGAGATTGCTGTAAAAAGGTTGAGCAGGAATTCTGGCCAAGGTGATGTGGAGTTTAAGAATGAAGTGGTGCTAATGGCCAGGCTACAACATCGGAATTTAGTCAAGCTAGTTGGTTTTTGTCTCAAGAAAGAAGAAAGGCTTCTTGTTTATGAGTTCCTTCCTAACAAAAGCCTTGATTACTTTATTTTTGATCCAATCAAGAGAGCATGTTTAAATTGGCAAAAGCGTGTCAAAATTATAGAAGGCATTTCTCGAGGTCTTCTTTATCTCCATCAAGATTCTCGAGTACGGATCATTCACCGTGATTTAAAGCCAAACAACATACTTTTAGATGAAGACATGAATGCTAAGATCTCAGATTTTGGTATGGCAAGGTTATTTGCAGTCGATCAAACTCAAAGCAACACAAGTACAATTGTTGGGACTTATGGATACATGGCACCAGAATATGTAAAACATGGAATCTTTTCAACAAAGTCAGATGTTTTTAGTTTCGGAGTATTGGTTTTAGAAATTATAAGTGGTCAAAAGAATGGTGAATTCCACATTGGGGAGAACATAGAGCATATAGGAACTGCTGCTTGGAAAAGTTGGAGTAAAGGAATATTGTCAAATATTGCAGATCCAACATTATTGATTGAAGAAGAAGGCTCTTCAAGAAGTGTAATGATGAGATGCATCCAAATATGTTTACTGTGTCTTCAAGAAAACGCAGCTCATAGGCCATCAATGGCTTCCATTGTTACGTTGCTAAGTAGCTCCTCCTGTACCATCCCAGTTCCTTCAGAACCATTCTTTTATAATTGGACAAGCATGCCAAGTATTAAGATTATTCCATCGTCATCATTTGGAGATCAATCTGTTGAAGAATCGAGAAATGAACTTACTTTTACAGAGCAATTTCCTCGCTAG 1980 0.4146 MPRISFLFFLLYLTSLISHHGTIAQQDFLKYVCGEGPANSNSSFRSNLRNLLLNMSFNTQIDYGFYNFSSGNNANKVYVIGLCRGDITVQDCRSCIQDSRVIILQVCSPNAREAIGWYDICFLRYSNRSIFGVMETSPGYNSSDSSDALEKDEFKNVLMQMMSYLRERAASGDSLRKFAVANASCPGNQTMYGLAQCTPNLSNKDCDICLSGAISDISKCCDGKRGGRVVRPSCYIRFGPDSFFDASAYNNTQSFVQSPLPHLASKQGKRNKSSRIVIAVVVAFTAGLTLLIFIVVIYLKPMRTPNKMETEAKDAADSLQMDFETIRMATNDFADANKLGQGGFGAVYLGRLYNGQEIAVKRLSRNSGQGDVEFKNEVVLMARLQHRNLVKLVGFCLKKEERLLVYEFLPNKSLDYFIFDPIKRACLNWQKRVKIIEGISRGLLYLHQDSRVRIIHRDLKPNNILLDEDMNAKISDFGMARLFAVDQTQSNTSTIVGTYGYMAPEYVKHGIFSTKSDVFSFGVLVLEIISGQKNGEFHIGENIEHIGTAAWKSWSKGILSNIADPTLLIEEEGSSRSVMMRCIQICLLCLQENAAHRPSMASIVTLLSSSSCTIPVPSEPFFYNWTSMPSIKIIPSSSFGDQSVEESRNELTFTEQFPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5531g00014 659 Gene3D - 139 243 IPR038408 -
Pral5531g00014 659 Gene3D - 25 129 IPR038408 -
Pral5531g00014 659 SMART serkin_6 333 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5531g00014 659 CDD STKc_IRAK 339 607 - -
Pral5531g00014 659 Gene3D Transferase(Phosphotransferase) domain 1 409 613 - -
Pral5531g00014 659 FunFam Cysteine-rich receptor-like protein kinase 10 137 243 - -
Pral5531g00014 659 FunFam Cysteine-rich receptor-like protein kinase 28 409 615 - -
Pral5531g00014 659 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Pral5531g00014 659 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Pral5531g00014 659 SUPERFAMILY Protein kinase-like (PK-like) 322 638 IPR011009 -
Pral5531g00014 659 Gene3D Phosphorylase Kinase; domain 1 297 408 - -
Pral5531g00014 659 Pfam Salt stress response/antifungal 150 238 IPR002902 -
Pral5531g00014 659 Pfam Salt stress response/antifungal 38 127 IPR002902 -
Pral5531g00014 659 Pfam Protein kinase domain 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5531g00014 659 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Pral5531g00014 659 FunFam Cysteine-rich receptor-like protein kinase 10 299 408 - -
Pral5531g00014 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Pral5531g00014 659 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 654 - -
Pral5531g00014 659 ProSiteProfiles Protein kinase domain profile. 333 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5531g00014 Pral-Chr5531 146963 150909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5531g00014 6 622 Receptor kinase-like Gene Family AT4G05200 43.730 4.75e-175 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5531g00014 Pkinase 6.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5531g00014 - - lang:109353867 675.241