Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5531g00011 ATGACCGTTGATTCATTGCAAATGGACTTTGAAACCATCAGAGCGGCAACGAATGATTTTTCTGATGCAAATAAGCTTGGACAGGGTGGATTTGGACCTGTTTACTTGGGTAGGCTATATAATGGACAAGAGATAGCTGTAAAAAGGTTGAGTAGAGATTCTGGGCAAGGTGAGATGGAGTTTAAGAATGAAGCGTTGCTGGTGGCCAAGCTACAACATCGGAATTTAGTGAGGTCACTTGGTTTTTGTCTCGAAAAAGAAGAAAAGCTCCTTATTTACGAGTTTGTTCCCAACAAAAGCCTTGATTGCTTCATCTTTGATTCCGTCAAAAGGGTGAAATTGAATTGGGAAAAGCGCTACAAAATTATAGAAGGCATTGCCAAAGGCCTTGCATACCTTCATCATGATTCTCGAATACGAATTGTTCATCGTGATCTCAAAGCAAGCAACGTGCTCTTAGATGAAGAGATGAATGCTAAAATATCAGACTTTGGCATGGCAAGATTATTTGTGATAGATCAAACTCAAGCCAAGACAAGCACAGTTGTTGGGACCTATGGATACATGGCACCGGAATACGTGATGAATGGAACCTTTTCAACTAAATCAGACGTCTTTAGTTTTGGAGTATTGGTTTTAGAAATTATAAGTGGCCAGAAAAAAGGTCAATTTCAGAATGGAGAAAATGAGGAGCACGTAGTAAGCGCGGTTTGGAAAAACTGGACAAAAGGGACATTGGCAAATATTGTGGATCCAACGTTGATGGAGGATGCTGGGTCAAGAAATGAAATAATGAGATGCATCCACATAGGGTTACTGTGTGTTCAAGAAAATGCCGAACACAGGCCAACAATGGCTTCCATTGTTCCAATGCTTAGTACTCATTCAATCACCCTTCCTGTTCCTTCAGAACCTTCATTTTATATCTGGAGAAGCTTACCAGGAATCAAATCACTATCTTCTGGAGATCAATCCGCCGACGGATCAATAAATCAGCTTTCAGTGTCAGAGCAGTATCCTCGGTAG 1026 0.4084 MTVDSLQMDFETIRAATNDFSDANKLGQGGFGPVYLGRLYNGQEIAVKRLSRDSGQGEMEFKNEALLVAKLQHRNLVRSLGFCLEKEEKLLIYEFVPNKSLDCFIFDSVKRVKLNWEKRYKIIEGIAKGLAYLHHDSRIRIVHRDLKASNVLLDEEMNAKISDFGMARLFVIDQTQAKTSTVVGTYGYMAPEYVMNGTFSTKSDVFSFGVLVLEIISGQKKGQFQNGENEEHVVSAVWKNWTKGTLANIVDPTLMEDAGSRNEIMRCIHIGLLCVQENAEHRPTMASIVPMLSTHSITLPVPSEPSFYIWRSLPGIKSLSSGDQSADGSINQLSVSEQYPR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5531g00011 341 ProSiteProfiles Protein kinase domain profile. 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5531g00011 341 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 321 - -
Pral5531g00011 341 PIRSF ILK 5 301 - -
Pral5531g00011 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Pral5531g00011 341 MobiDBLite consensus disorder prediction 320 341 - -
Pral5531g00011 341 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Pral5531g00011 341 Pfam Protein tyrosine and serine/threonine kinase 24 291 IPR001245 GO:0004672|GO:0006468
Pral5531g00011 341 Gene3D Transferase(Phosphotransferase) domain 1 96 299 - -
Pral5531g00011 341 SUPERFAMILY Protein kinase-like (PK-like) 9 319 IPR011009 -
Pral5531g00011 341 FunFam Cysteine-rich receptor-like protein kinase 10 1 95 - -
Pral5531g00011 341 FunFam cysteine-rich receptor-like protein kinase 10 96 299 - -
Pral5531g00011 341 CDD STKc_IRAK 26 292 - -
Pral5531g00011 341 SMART serkin_6 20 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5531g00011 Pral-Chr5531 126628 140627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5531g00011 2 341 Receptor kinase-like Gene Family AT4G23140 54.155 1.99e-138 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5531g00011 PK_Tyr_Ser-Thr 7.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5531g00011 - - gmx:100784223 468.003