Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5531g00008 ATGGCTGCGGCGAACCAAGCGCGGCCACTTTCTATAACCTCCGAAAGGATTAACCTCAAAACGGTGGAAGAAGCCGTGAGATCGCTCGTGAAGTGGAGAAAATCCAGGTCCCACAGCGAGAAGCTCAACTTATCGGATCAAGAAGACGAGTTCTTCTACCTCGTTCTCTCCCTCATTAAAGTCCCCCATCGAGATCGCGCAAATACTTATAAGATTCTTCTTCCGCATTCTCTCCTCTCCGAATCTTCCGAGCTCTGTTTAATCATCGATGACAGAATCAAGAAAGGACTCACCAAGGACGATGCGCAGAAGAAGATCAAATCCGAGAATATACCTATTTCGAATGTCTTGAAGCTCTCGAAGCTCAAGTCAAACTACCGTTCGTCCGAGGCGAAGCGAGAGCTATGTGCTTCTTACAATATGTTTTTCGCGGACAAGAGTGCTGCTCCGCAGTTGCCGGGCCTATTGGGGAAGAAGAAGGTTCCTGTGCCGTTGGATTTGAAGGATAGGAATTGGAAAGAGCAGATTGAGAAGGCGTGTTCTTCAACATTGTTGTGTTTGAAGACAGGTACGTGTTGTGTGGTGAAAGTGGCCAAAGTGTCGATGGAGATGGGTGAGATCGTTGAGAATGTGATTGCTGCTTGTAATGGTATCGCCGACGTTGTGCCCAGTAAGTGGGGGAATATAAGGTCGTTTCACTTGAAGCTGTTGGTGTCTCTTTCTTTGCCTATTTATCAGGCTGATCCAGATAAGGATTCTAATTAA 765 0.468 MAAANQARPLSITSERINLKTVEEAVRSLVKWRKSRSHSEKLNLSDQEDEFFYLVLSLIKVPHRDRANTYKILLPHSLLSESSELCLIIDDRIKKGLTKDDAQKKIKSENIPISNVLKLSKLKSNYRSSEAKRELCASYNMFFADKSAAPQLPGLLGKKKVPVPLDLKDRNWKEQIEKACSSTLLCLKTGTCCVVKVAKVSMEMGEIVENVIAACNGIADVVPSKWGNIRSFHLKLLVSLSLPIYQADPDKDSN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5531g00008 254 Gene3D - 108 183 IPR016095 -
Pral5531g00008 254 CDD Ribosomal_L1 22 244 IPR028364 -
Pral5531g00008 254 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 24 235 - -
Pral5531g00008 254 SUPERFAMILY Ribosomal protein L1 26 245 IPR023674 -
Pral5531g00008 254 Gene3D - 184 236 - -
Pral5531g00008 254 FunFam Ribosomal protein L1p/L10e family 95 181 - -
Pral5531g00008 254 Pfam Ribosomal protein L1p/L10e family 45 236 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5531g00008 Pral-Chr5531 70339 71193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5531g00008 24 235 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 24.312 7.51e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5531g00008 K14775 - qsa:O6P43_014803 318.931