Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5531g00005 ATGAGGGGAGAGAATTCAGAACCAACCCGCATTCCCATACCCGCATTCCTCTCCAAACCAGACAATGCCTCTGTCCCCCACTTGCCCACCACCGCAGATCACTCTCTCCGGCCACTCCACAAGCGCCGCCGCAGCAGCAGAGACCAAACCACCACTACCGGGAAGAAGACGAAGACGATAAAGGAAGATCGCTGTGATGATGAGAAAGTAGAAGAAGATCATGAAGCGGGAGAAGAAGAAGACAAGGAGGAGATAGAGAGGAAGATAGAGGCATTACAGAGGATAGTTCCCGGCGGCGAGTCCTTAGGAATGGACAAGCTGTTTGATGAAACTGCAGATTATATAATGGCATTGAAGTACCAAATCAAAGGCTTAAGAGCTCTCTCAAGCTTATTCGAGAGGTTAGAGAAGGACAAGTCCAAACTTGGAGGTTGA 435 0.4943 MRGENSEPTRIPIPAFLSKPDNASVPHLPTTADHSLRPLHKRRRSSRDQTTTTGKKTKTIKEDRCDDEKVEEDHEAGEEEDKEEIERKIEALQRIVPGGESLGMDKLFDETADYIMALKYQIKGLRALSSLFERLEKDKSKLGG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5531g00005 144 Coils Coil 75 95 - -
Pral5531g00005 144 MobiDBLite consensus disorder prediction 45 71 - -
Pral5531g00005 144 MobiDBLite consensus disorder prediction 1 85 - -
Pral5531g00005 144 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 30 132 IPR044660 GO:0006355
Pral5531g00005 144 CDD bHLH_AtIBH1_like 87 128 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5531g00005 Pral-Chr5531 36418 56326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5531g00005 85 136 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G05800 36.538 7.65e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5531g00005 - - pcin:129298466 165.622