Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5531g00001 ATGTCTTTAAAAGCGGAACTGTCTAAGAAGGTTTTGGGTGTGAAATTATGGATTTTAATTGGGATCTGTGTAGGCGCGTTTATAATATTGATTCTTTGTATATTATCCATATGGGTGATGTTTCGGAGAAAATCTAGAAAATCTCTGGACAGGTATTCTTTATCCCAAATACCAAATATCTCGAAAGATATTAAGGTGGACAAAGTTGGGGTGCAGAGTTCTCATGATCACCCAGAAAGCGTATTTATTCCTGTGAATGACAAAGCAACTGATAAGAATTCAGATAAGATGGTTGTCCACTTAGGTATGAGCAAAGCCAGTGATCATGACAATATCAGTCAATGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCCCTGTCAGGAGAAGAAGGAAGCTCTGGGACTGGAAAGAAGCAATCTGCATTATCATATGGAGGGCTTGTGACTGCATCTCCTTTAGTTGGCTTGCCAGAAGTTTCTCATCTTGGATGGGGCCATTGGTTTACACTTAGGGATCTGGAGCTAGCAACAAATCGTTTCTCAGCTGAAAATGTGCTAGGTGAGGGTGGATATGGTGTTGTTTACAAGGGCAGACTGATCAATGGAACTGAGGTGGCGGTGAAGAAAATTCTTAATAACTTGGGACAAGCGGAGAAAGAATTCAGGGTAGAAGTGGAAGCTATAGGCCATGTACGACATAAAAATCTTGTACGCTTGCTTGGATACTGCATTGAAGGAGTGCACAGGCTTTTGGTTTATGAATATGTAAATAACGGCAACTTAGAACAATGGTTACATGGGGCTTTGCGCCAACATGGAATTCTTACATGGGAGGCCCGCATGAAAGTTGTACTTGGCACTGCCAAAGCGCTTGCTTACTTGCATGAAGCAATTGAACCAAAAGTTGTTCACCGTGATATCAAGTCTAGCAACATATTAATTGATGATGAGTTTAATGCAAAAGTTTCTGACTTTGGATTGGCCAAACTTTTGGATTCAGGAGAAAGCCACATAACTACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAGTATGCTAATACTGGTTTATTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCCTCTTGGAAGCAGTCACTGGAAGGGACCCTGTAGACTATGGGCGACCTGCAAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAGAAGAGCTGACGAGGTTATTGATCCAAGCCTTGAAGTTAAACCACCAACACGAGCTTTAAAGCGTGCCCTTCTGGTTGCACTTAGGTGTGTTGATCCTGATGCAGACAAGAGACCCAAAATGGGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCCTTCCGAGAGGACCGAAGGAATCGAAAGAGCCGCTCTACTAGCATGGAAATTGATTCCATGAAGGATATTTCTGGTTCATCTGAAGTAGAAAAGAAGGCAGAAGAGGCCGAGAACCAAGCACCAGATACAACTGAGGGGTAG 1518 0.4236 MSLKAELSKKVLGVKLWILIGICVGAFIILILCILSIWVMFRRKSRKSLDRYSLSQIPNISKDIKVDKVGVQSSHDHPESVFIPVNDKATDKNSDKMVVHLGMSKASDHDNISQCSSIYHHERGFSSLSGEEGSSGTGKKQSALSYGGLVTASPLVGLPEVSHLGWGHWFTLRDLELATNRFSAENVLGEGGYGVVYKGRLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGALRQHGILTWEARMKVVLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYGRPANEVNLVEWLKMMVGTRRADEVIDPSLEVKPPTRALKRALLVALRCVDPDADKRPKMGQVVRMLEADEYPFREDRRNRKSRSTSMEIDSMKDISGSSEVEKKAEEAENQAPDTTEG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5531g00001 505 Coils Coil 202 222 - -
Pral5531g00001 505 Gene3D Transferase(Phosphotransferase) domain 1 258 471 - -
Pral5531g00001 505 MobiDBLite consensus disorder prediction 458 475 - -
Pral5531g00001 505 MobiDBLite consensus disorder prediction 482 498 - -
Pral5531g00001 505 CDD STKc_IRAK 188 454 - -
Pral5531g00001 505 FunFam Putative receptor-like protein kinase 164 257 - -
Pral5531g00001 505 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5531g00001 505 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Pral5531g00001 505 ProSiteProfiles Protein kinase domain profile. 182 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5531g00001 505 FunFam Putative receptor-like serine/threonine-protein kinase 258 468 - -
Pral5531g00001 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Pral5531g00001 505 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Pral5531g00001 505 PANTHER OS01G0323000 PROTEIN 3 478 - -
Pral5531g00001 505 MobiDBLite consensus disorder prediction 458 505 - -
Pral5531g00001 505 SUPERFAMILY Protein kinase-like (PK-like) 166 456 IPR011009 -
Pral5531g00001 505 Pfam Protein kinase domain 184 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5531g00001 Pral-Chr5531 6195 11189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5531g00001 13 456 Trihelix Transcription Factor Family AT1G70460 40.000 2.87e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral5531g00001 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5531g00001 - - tcc:18612176 864.759