Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5523g00014 ATGGTTTGTGCAGATCAAGTTGGGTATTCAGAATCTGAGTCTTTCTTCAGTTTTATCAGAGCCATTGATCCCCAGAACGTGCTTCATATTGATGCGTCCTCAGCTGCGAGAATCTCATCATCAAATCCATGCATGATGAAGTTGAAGGGTGTTAGATGCGATTCTGAAGGTACCAACATTGTAGTAATCAGGTTAGAGAACATGAATCTAAGTGGGACAATTGATGCAGAATCACTGTGCAGGCTTAAGAAGCTGAGGGTTTTGAGCTTAGCTGAGAATAACATCAGAGGTGTTCTTCCAAACTCAATTCTGAACTGTGCCAGGTTGAGTTATCTGAATCTCTCAAGCAATCATTTGAGTGGGAAAATACCCAGTGGCTTAATGAAACTCAAGTTTCTGAGAAAACTCGACATCTCCAACAATAACTTTGCTGTGAGCCTTCATCATCAAGAATCTAATCACTTCTCTGCTCATTCGTTAATGCAATCAATGGCAGATGCTCCCGTTAGTACCATTACTGTATCCGATGATGAAGGAGACGATTTCTCGATCCTATACGTTTTGGTCATTGGAATAATGTTGTTATTTTTCGGCTTTTACTTCGCAAGCATTCGGGTTGGGCAAAAAAGTAATAATGCAGATAATAAAAATAATAATAAGACGTTGAAGAGCATTAAGCAGTTTCATATCAGAGAGGCTACAACTGAGGTCAAGGAAGAAGAAGAAATGAAAAAGATGAAGAAAATTAGAGATTCAGATGAGCTTGTGTTCTTTGAAGAGAATGAGAGATTCACAATGGCGGATCTTCTTCAAGCCACTGCTGAGTTAAGAAGCCAAAGCTTCTGTAGCTGCCTTTATGAGGTAAAACTCAAGAACGGCGCTCATTATGCAGTGAAGAGATTCAAGGATTTGCAGATATCTCCATATGATTTCAATGAAACATTGAGGAGGATAAGCATGTTGAAACATCCTAATATCCTTCCCCTTGTTGGTTACCGTTCTGCCACTGAAGAAAAACTCGTCATTTACAGATATCAGAACAATGGAAGTCTGCTAAATCTTTTCAAGGACCATCTTGAAGGCAAGAAATATTTTTCATGGAAGCTGAGGCTATCTATAGCACGAGGGATAGCAAAAGGATTGGCATTTATACACCAGAAAATAGAACAAGCAGGAGATATAATTCCACATGGGAATCTAAAACTATCAAATATCCTACTCAACAACAGCAACGAACCACTGATAAGCGAGCATGGATTATCAAAGTTCCTAGACACAACGACAAGATTGTTCTTCATTTCTGGCCTGGCATACACAGCCCCAGAGAGAAGTTTATCAGAAAAGGCCGATGTTTATAGCTTTGGAGTGATCCTCTTAGAGCTACTCACGGGGAAGAGCATAGAACTGAGCGGAATAGATCTCACAAAGTGGGTCAGATCAATGGTGAAGGAGGAATGGACAGTGGAAGTGTTTGACAAGGAGGTTAGGGAAAGTGAATATCAGTGGGCATTTCCTGTGTTAAACACAGCCCTTATGTGCGTTTCGAGTCTCCCAGAAACACGACCTTCCATGGAAGAGATCGTGGAGATGATAGAGGAAGTGACGATGGAGGAGAAAGAAGAGAAAGAAGGTGATGATGATAATAATGTTCACACAACTTGCTGCCCTATTGTTGGATCCAATCAAAAACAAGATTTTTGCTCGCTTCATAAGATCATTCCTGATACGTGGGATTCTCCGGCATCCAATTATTGA 1755 0.4051 MVCADQVGYSESESFFSFIRAIDPQNVLHIDASSAARISSSNPCMMKLKGVRCDSEGTNIVVIRLENMNLSGTIDAESLCRLKKLRVLSLAENNIRGVLPNSILNCARLSYLNLSSNHLSGKIPSGLMKLKFLRKLDISNNNFAVSLHHQESNHFSAHSLMQSMADAPVSTITVSDDEGDDFSILYVLVIGIMLLFFGFYFASIRVGQKSNNADNKNNNKTLKSIKQFHIREATTEVKEEEEMKKMKKIRDSDELVFFEENERFTMADLLQATAELRSQSFCSCLYEVKLKNGAHYAVKRFKDLQISPYDFNETLRRISMLKHPNILPLVGYRSATEEKLVIYRYQNNGSLLNLFKDHLEGKKYFSWKLRLSIARGIAKGLAFIHQKIEQAGDIIPHGNLKLSNILLNNSNEPLISEHGLSKFLDTTTRLFFISGLAYTAPERSLSEKADVYSFGVILLELLTGKSIELSGIDLTKWVRSMVKEEWTVEVFDKEVRESEYQWAFPVLNTALMCVSSLPETRPSMEEIVEMIEEVTMEEKEEKEGDDDNNVHTTCCPIVGSNQKQDFCSLHKIIPDTWDSPASNY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5523g00014 584 Gene3D Phosphorylase Kinase; domain 1 233 345 - -
Pral5523g00014 584 FunFam Leucine-rich repeat receptor-like kinase 23 126 - -
Pral5523g00014 584 SUPERFAMILY L domain-like 26 148 - -
Pral5523g00014 584 Coils Coil 230 250 - -
Pral5523g00014 584 SUPERFAMILY Protein kinase-like (PK-like) 284 532 IPR011009 -
Pral5523g00014 584 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 144 IPR046959 -
Pral5523g00014 584 Gene3D Ribonuclease Inhibitor 15 165 IPR032675 -
Pral5523g00014 584 Gene3D Transferase(Phosphotransferase) domain 1 347 557 - -
Pral5523g00014 584 ProSiteProfiles Protein kinase domain profile. 270 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5523g00014 584 Pfam Protein kinase domain 284 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5523g00014 584 Pfam Leucine rich repeat 84 143 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5523g00014 Pral-Chr5523 77879 79998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5523g00014 59 548 Receptor kinase-like Gene Family AT2G36570 32.740 7.97e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral5523g00014 Pkinase 6.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5523g00014 - - aprc:113874587 560.066