Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5523g00013 ATGCCGATTGTGAAGCCTGACCAATCGGGAGATTCCGAACCTTTCGTTGAAATCGACCCGACCGGAAGGTACGGCCGATACCCTGAGCTGTTGGGGTCCGGTGCGGTGAAGAAAGTGTACAGAGCATTTGATCAAGAGGAAGGAATAGAGGTGGCGTGGAACCAGGTCAAACTGAGGAACTTCAGCGACGACCCGGCCATGGTGGATCGGCTTTACTCCGAAGTGAGATTGCTGAGAAGCCTCACCAATAAGAACATCATAGCTCTCTACAATTTCTGGAGGGACGATGAACGGGGCACTCTGAACTTCATCACTGAGGTCTGTACGAGCGGGAATCTGAGGAATTACAGGAAGAAGCACAGGCATGTGTCGATGAAGGCTCTGAAGAAGTGGTCGAAGCAGATTCTGAAAGGGTTGAACTATATGCATACGCACGAGCCTTGTATCATCCACAGAGATCTCAATTGCAGTAATATTTTCGTCAATGGGAATACTGGCCAGGTTAAGATTGGAGACTTGGGTCTGGCAGCAATAGTGGGAAAGAACCACTCTGCACATTCAATTCTGGGGACACCGGAGTTCATGGCGCCGGAGTTATACGACGAGGACTACACAGAGCTGGTGGACATATACTCATTTGGGATGTGTGTTTTGGAGATGGTGACAATGGAGATTCCTTACAGTGAGTGTGACAATGTGGCAAGGATTTACAAGAAGGTTTCGTCTGGGGTGAGACCTGAGGCACTGAACAAGGTCAGAGATCAAGAGGTTAAGGTTTTCATTGAGAGGTGCCTTGCTCAGCCGAGGGCAAGGCCTTCTGCTGCTCAGCTCCTCCGGGATCCTTTCTTTGATGGCATTGTTGATGATGACGAAAATGATAATAATTCTATTTCCTAA 897 0.4872 MPIVKPDQSGDSEPFVEIDPTGRYGRYPELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVDRLYSEVRLLRSLTNKNIIALYNFWRDDERGTLNFITEVCTSGNLRNYRKKHRHVSMKALKKWSKQILKGLNYMHTHEPCIIHRDLNCSNIFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTMEIPYSECDNVARIYKKVSSGVRPEALNKVRDQEVKVFIERCLAQPRARPSAAQLLRDPFFDGIVDDDENDNNSIS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5523g00013 298 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Pral5523g00013 298 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 285 - -
Pral5523g00013 298 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5523g00013 298 PIRSF TyrPK_CSF1-R 119 280 - -
Pral5523g00013 298 PIRSF TyrPK_CSF1-R 25 129 - -
Pral5523g00013 298 FunFam probable serine/threonine-protein kinase WNK9 108 290 - -
Pral5523g00013 298 CDD STKc_WNK 23 283 - -
Pral5523g00013 298 Gene3D Phosphorylase Kinase; domain 1 10 106 - -
Pral5523g00013 298 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5523g00013 298 SUPERFAMILY Protein kinase-like (PK-like) 26 289 IPR011009 -
Pral5523g00013 298 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5523g00013 Pral-Chr5523 71851 74026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5523g00013 7 287 MAP Kinase Kinase Kinase AT5G55560 81.851 0.0 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral5523g00013 Pkinase 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5523g00013 K08867 - gmx:100786910 540.806