Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5523g00011 ATGGCTCCCACAGATTTCAACGGCCATGTAAACGAACCATCTATGCAAACACAAGGTTCAAGCCAAGCTCAATCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCGTCAAATGAATTAAGTTTATCATCACCTGTCCAAATGGTTTGTTCTGATGCTACTGCTCTTGTTCAAGCCGATATGGATGGGTCTAACCCCAGAGGCAATGTAGCTAATGGGCTTCAAGCTTCACAAGTCGAAGTGAAAGATAGTGGTATCTCAGTTACTGAGAGAACATCTGATGATGGGTATAATTGGCGAAAATATGGGCAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAGGTCAAAAAGCTGTTCGAACGTTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGATCCCATGATCACCCTAAACCTCAACCAAGTCGCCGATACTCTTCTGGCACTATTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCTGGCCAAGATGTCAATATGTATGGTCAAGTGTCTCACACTACTGAGCCCAACAGTAATCCAGAGTTGTCTGTTGTAGCAGCAAGTGATGATGGTCGGGAGGGTGCAGGACTAGCTTCCAATAGGATCAATGATGAAGTTGATGATGACGACCCCTTCTCAAAGCGAAGGAAGATGGAGAATGGACATGCTGACATCACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGCGAAGTTGACATATTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACCAATGCCGGTTGCCCTGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAGTAGTAGCCATGATACAGCAGGACCAGCAGCTCCAGTTGGACAGACCCGAATAAGATCAGAAGAAAGCGATACCATTAGCCTCGACCTTGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGACAAGGACAAATGCTGCTGTCTGAATTTGGGAATGATCAAACTCATAGCAACAGTTCCAATTTCAAGTTTGTTCATAATGGCCCAGCTCCGGCATACTTTGGTGTTTTCAATAATGGCTCAAATCCATTTGGTTCTTCTAGAGAGTCCTCATCTCTGAACCATACCACTTATCGGTGCCCGCAGCCACAGGGCATAGGAAGAATACTAACTGGTCCGTGA 1347 0.4484 MAPTDFNGHVNEPSMQTQGSSQAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSDATALVQADMDGSNPRGNVANGLQASQVEVKDSGISVTERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTIMSMHEERFEKPSSLSGQDVNMYGQVSHTTEPNSNPELSVVAASDDGREGAGLASNRINDEVDDDDPFSKRRKMENGHADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNDQTHSNSSNFKFVHNGPAPAYFGVFNNGSNPFGSSRESSSLNHTTYRCPQPQGIGRILTGP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5523g00011 448 Pfam WRKY DNA -binding domain 97 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 Pfam WRKY DNA -binding domain 270 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 SMART WRKY_cls 269 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 SMART WRKY_cls 96 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 ProSiteProfiles WRKY domain profile. 264 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 SUPERFAMILY WRKY DNA-binding domain 92 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 Gene3D WRKY domain 84 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 Gene3D WRKY domain 254 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 ProSiteProfiles WRKY domain profile. 91 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 MobiDBLite consensus disorder prediction 223 238 - -
Pral5523g00011 448 MobiDBLite consensus disorder prediction 420 436 - -
Pral5523g00011 448 MobiDBLite consensus disorder prediction 1 44 - -
Pral5523g00011 448 MobiDBLite consensus disorder prediction 212 238 - -
Pral5523g00011 448 MobiDBLite consensus disorder prediction 9 44 - -
Pral5523g00011 448 FunFam WRKY transcription factor 33 256 322 - -
Pral5523g00011 448 MobiDBLite consensus disorder prediction 420 448 - -
Pral5523g00011 448 MobiDBLite consensus disorder prediction 325 353 - -
Pral5523g00011 448 SUPERFAMILY WRKY DNA-binding domain 261 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00011 448 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 364 IPR044810 GO:0003700
Pral5523g00011 448 FunFam WRKY transcription factor 84 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5523g00011 Pral-Chr5523 51886 56195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5523g00011 12 448 WRKY Transcription Factor Family AT4G26640 56.954 6.46e-155 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5523g00011 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5523g00011 - - adu:107464084 657.521