Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5523g00009 ATGGACGCCGCTATCAACTCCGCCGAGGCTCGCTCAGCTTCGGAGCTCCGGCTCCGCCAGGTCTCTTCCTCCGATCCGACTCAATTCGTCGTTTCCCGAGGTGCAAGGTACAAGCTCATGTCTCCTGCTAGTCTTCCGATCTCCAGGTCGCCCTGTATCACGATTCCGCCTGGCCTTAGTCCCTCCTCGTTTCTTGACTCCCCCGTGCTTCTCTCCAACGTCAAGGTGGAGCCTTCACCAACTACTGGGTCTCTTACTAAACCTCTGTCTGTTCAGGAATCTGTTTGTCCTGCCACATATCCTGTAACAACTGTACGCTTCAAAACCAATACTGTTGATGACAAAATATCTAGCTTCTTTGAGTTTAACTCAAACAATAGATCGAATATGGCTCCCACAGATTTCAACGGCCATGTAAACGAACCATCTATGCAAACACAAGGTTCAAGCCAAGCTCAATCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCGTCAAATGAATTAAGTTTATCATCACCTGTCCAAATGGTTTGTTCTGATGCTACTGCTCTTGTTCAAGCCGATATGGATGGGTCTAACCCCAGAGGCAATGTAGCTAATGGGCTTCAAGCTTCACAAGTCGAAGTGAAAGATAGTGGTATCTCAGTTACTGAGAGAACATCTGATGATGGGTATAATTGGCGAAAATATGGGCAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAGGTCAAAAAGCTGTTCGAACGTTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGATCCCATGATCACCCTAAACCTCAACCAAGTCGCCGATACTCTTCTGGCACTATTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCTGGCCAAGATGTCAATATGTATGGTCAAGTGTCTCACACTACTGAGCCCAACAGTAATCCAGAGTTGTCTGTTGTAGCAGCAAGTGATGATGGTCGGGAGGGTGCAGGACTAGCTTCCAATAGGATCAATGATGAAGTTGATGATGACGACCCCTTCTCAAAGCGAAGGAAGATGGAGAATGGACATGCTGACATCACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGCGAAGTTGACATATTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACCAATGCCGGTTGCCCTGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAGTAGTAGCCATGATACAGCAGGACCAGCAGCTCCAGTTGGACAGACCCGAATAAGATCAGAAGAAAGCGATACCATTAGCCTCGACCTTGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGACAAGGACAAATGCTGCTGTCTGAATTTGGGAATGATCAAACTCATAGCAACAGTTCCAATTTCAAGTTTGTTCATAATGGCCCAGCTCCGGCATACTTTGGTGTTTTCAATAATGGCTCAAATCCATTTGGTTCTTCTAGAGAGTCCTCATCTCTGAACCATACCACTTATCGGTGCCCGCAGCCACAGGGCATAGGAAGAATACTAACTGGTCCGTGA 1734 0.4619 MDAAINSAEARSASELRLRQVSSSDPTQFVVSRGARYKLMSPASLPISRSPCITIPPGLSPSSFLDSPVLLSNVKVEPSPTTGSLTKPLSVQESVCPATYPVTTVRFKTNTVDDKISSFFEFNSNNRSNMAPTDFNGHVNEPSMQTQGSSQAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSDATALVQADMDGSNPRGNVANGLQASQVEVKDSGISVTERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTIMSMHEERFEKPSSLSGQDVNMYGQVSHTTEPNSNPELSVVAASDDGREGAGLASNRINDEVDDDDPFSKRRKMENGHADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNDQTHSNSSNFKFVHNGPAPAYFGVFNNGSNPFGSSRESSSLNHTTYRCPQPQGIGRILTGP 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5523g00009 577 SMART WRKY_cls 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 SMART WRKY_cls 398 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 SUPERFAMILY WRKY DNA-binding domain 390 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 Gene3D WRKY domain 383 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 Gene3D WRKY domain 213 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 MobiDBLite consensus disorder prediction 454 482 - -
Pral5523g00009 577 FunFam WRKY transcription factor 213 285 - -
Pral5523g00009 577 SUPERFAMILY WRKY DNA-binding domain 221 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 ProSiteProfiles WRKY domain profile. 220 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 MobiDBLite consensus disorder prediction 549 577 - -
Pral5523g00009 577 MobiDBLite consensus disorder prediction 341 367 - -
Pral5523g00009 577 FunFam WRKY transcription factor 33 385 451 - -
Pral5523g00009 577 ProSiteProfiles WRKY domain profile. 393 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 489 IPR044810 GO:0003700
Pral5523g00009 577 MobiDBLite consensus disorder prediction 130 168 - -
Pral5523g00009 577 Pfam WRKY DNA -binding domain 226 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 Pfam WRKY DNA -binding domain 399 455 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00009 577 MobiDBLite consensus disorder prediction 549 565 - -
Pral5523g00009 577 MobiDBLite consensus disorder prediction 352 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5523g00009 Pral-Chr5523 51886 56871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5523g00009 40 577 WRKY Transcription Factor Family AT4G26640 56.318 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5523g00009 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5523g00009 - - adu:107464084 795.808