Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5523g00008 ATGGACGCCGCTATCAACTCCGCCGAGGCTCGCTCAGCTTCGGAGCTCCGGCTCCGCCAGGTCTCTTCCTCCGATCCGACTCAATTCGTCGTTTCCCGAGGTGCAAGGTACAAGCTCATGTCTCCTGCTAGTCTTCCGATCTCCAGGTCGCCCTGTATCACGATTCCGCCTGGCCTTAGTCCCTCCTCGTTTCTTGACTCCCCCGTGCTTCTCTCCAACGTCAAGGTGGAGCCTTCACCAACTACTGGGTCTCTTACTAAACCTCTGTCTGTTCAGGAATCTGTTTGTCCTGCCACATATCCTGTAACAACTGTACGCTTCAAAACCAATACTGTTGATGACAAAATATCTAGCTTCTTTGAGTTTAACTCAAACAATAGATCGAATATGGCTCCCACAGATTTCAACGGCCATGTAAACGAACCATCTATGCAAACACAAGGTTCAAGCCAAGCTCAATCTTCTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGCCGTCAAATGAATTAAGTTTATCATCACCTGTCCAAATGGTTTGTTCTGATGCTACTGCTCTTGTTCAAGCCGATATGGATGGGTCTAACCCCAGAGGCAATGTAGCTAATGGGCTTCAAGCTTCACAAGTCGAAGTGAAAGATAGTGGTATCTCAGTTACTGAGAGAACATCTGATGATGGGTATAATTGGCGAAAATATGGGCAGAAGCATGTTAAAGGGAGTGAATTTCCACGCTGCTATTACAAATGTACACATCCTAACTGTGAGGTCAAAAAGCTGTTCGAACGTTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGATCCCATGATCACCCTAAACCTCAACCAAGTCGCCGATACTCTTCTGGCACTATTATGTCTATGCATGAGGAGAGATTTGAGAAGCCTTCATCTTTGTCTGGCCAAGATGCAAGTGATGATGGTCGGGAGGGTGCAGGACTAGCTTCCAATAGGATCAATGATGAAGTTGATGATGACGACCCCTTCTCAAAGCGAAGGAAGATGGAGAATGGACATGCTGACATCACTCCTATAGTTAAGCCTATTCGAGAACCAAGGGTTGTTGTACAAACTCTAAGCGAAGTTGACATATTGGATGATGGGTATCGCTGGCGAAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCCAACCCTAGGAGTTACTACAAATGCACCAATGCCGGTTGCCCTGTTAGGAAACATGTGGAGAGGGCTTCTCATGATCCCAAAGCAGTAATAACCACATATGAGGGTAAGCACAATCATGATGTACCTACTGCAAGGAGTAGTAGCCATGATACAGCAGGACCAGCAGCTCCAGTTGGACAGACCCGAATAAGATCAGAAGAAAGCGATACCATTAGCCTCGACCTTGGGATGGGTATCAGCTCGGCTGCTGAAAATAAATTGAAGGGACAAGGACAAATGCTGCTGTCTGAATTTGGGAATGATCAAACTCATAGCAACAGTTCCAATTTCAAGTTTGTTCATAATGGCCCAGCTCCGGCATACTTTGGTGTTTTCAATAATGGCTCAAATCCATTTGGTTCTTCTAGAGAGTCCTCATCTCTGAACCATACCACTTATCGGTGCCCGCAGCCACAGGGCATAGGAAGAATACTAACTGGTCCGTGA 1665 0.4631 MDAAINSAEARSASELRLRQVSSSDPTQFVVSRGARYKLMSPASLPISRSPCITIPPGLSPSSFLDSPVLLSNVKVEPSPTTGSLTKPLSVQESVCPATYPVTTVRFKTNTVDDKISSFFEFNSNNRSNMAPTDFNGHVNEPSMQTQGSSQAQSSASSPLVKSEMAMPSNELSLSSPVQMVCSDATALVQADMDGSNPRGNVANGLQASQVEVKDSGISVTERTSDDGYNWRKYGQKHVKGSEFPRCYYKCTHPNCEVKKLFERSHDGQITEIIYKGSHDHPKPQPSRRYSSGTIMSMHEERFEKPSSLSGQDASDDGREGAGLASNRINDEVDDDDPFSKRRKMENGHADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDTAGPAAPVGQTRIRSEESDTISLDLGMGISSAAENKLKGQGQMLLSEFGNDQTHSNSSNFKFVHNGPAPAYFGVFNNGSNPFGSSRESSSLNHTTYRCPQPQGIGRILTGP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5523g00008 554 Pfam WRKY DNA -binding domain 376 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 Pfam WRKY DNA -binding domain 226 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 SMART WRKY_cls 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 SMART WRKY_cls 375 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 MobiDBLite consensus disorder prediction 329 344 - -
Pral5523g00008 554 FunFam WRKY transcription factor 213 285 - -
Pral5523g00008 554 FunFam WRKY transcription factor 33 362 428 - -
Pral5523g00008 554 SUPERFAMILY WRKY DNA-binding domain 221 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 MobiDBLite consensus disorder prediction 526 554 - -
Pral5523g00008 554 Gene3D WRKY domain 213 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 Gene3D WRKY domain 360 436 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 467 IPR044810 GO:0003700
Pral5523g00008 554 ProSiteProfiles WRKY domain profile. 220 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 MobiDBLite consensus disorder prediction 431 459 - -
Pral5523g00008 554 ProSiteProfiles WRKY domain profile. 370 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 MobiDBLite consensus disorder prediction 526 542 - -
Pral5523g00008 554 SUPERFAMILY WRKY DNA-binding domain 367 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5523g00008 554 MobiDBLite consensus disorder prediction 301 344 - -
Pral5523g00008 554 MobiDBLite consensus disorder prediction 130 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5523g00008 Pral-Chr5523 51886 56877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5523g00008 40 554 WRKY Transcription Factor Family AT4G26640 55.235 6.86e-180 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5523g00008 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5523g00008 - - adu:107464084 758.829