Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5523g00007 ATGGAAACTTCAGCAAAACATGCCTATGGGTCTGGAAGGTTCTATGTTGAGCACCAAGGCTATCACTCATCTGATAACACCAGCCAAGCAACAACTTACTCTTCAGTTCAAACTTTAGAACAACATTACACCCTAGAATCTTCCTCAAGGACAAACAGTTTTCCAAACCATAATAATTCTCCATCTTCTGCCAATTTCTCACCTCATGACAGCCCCGCGTCACAGCTGGAGTCAAATTCTTATGCGCTAATGCCCCAGCAGTCACTTGAAATCATCAGTGGCTCCCTAGAGGATGAATCTTGCTTGACGAATGACCTTGATGACCTGAGCCATGTGATAAGAGAGTTAGAAACTGCTATGCGGGGAACTGATACCGAAATTCTGGGGATGTGTGACACTGTAGTTCCTATGGAATCTAATCAGATTTTGTCGGAGGCAGAGAAGTGGAAACTAACAACGGACGTAGCATCTAGAGGGGATTTGAAAGAGATGCTTTTTGCTTGTGCGAAATCGATGGATGCAAATGATATAGAGATAACTGAATATCTGATGTCTGAGATGAGGAAAATGGTGTCCATTTCGGGCAACCCAGTCCAACGGATAGGAGCTTATATGTTGGAATCTCTTGTGGCGAGGATGGCCTGTTCTGGAAGTGCAATCTACAAGGCCTTAAAATGCAAGGAGCCTACTGGTAACGAACTCCTTTCCTACATGCACTTGCTGTTTGAAATCTGCCCATACTTCAAGTTTGGCTATTTGTCAGCAAATGGGGCGATTGCTGAAGCCATGAAGGAAGAAAATAGAGTCCATATTATTGATTTTCAGATTAACCAGGGGAGCCAGTGGATAAGCCTAATTCAGGCTCTTGCTGGACGACCAGGTGGGCCGCCAGCACTCAGAATAACTGGCTTTGACGACTCCTTTTCAAATTTTGCTCGTGGAGGGGGCCTCGATATTGTGCGGAAAAGACTAACAAGACTTGCACAATCGTGTCAGGTTCCCTTTGAGTTCCATGCTGCTGGTGTTGCTCCTTCAAAGGTGCAACTCGAAGACCTTAAGCTTCAACCTGGCGAAGCTGTTGCTGTAAATTTTGCCATGATGCTTCACCATGTACCGGACGAGACTGTGGACAGTCACAATCCTCGTGAACGGTTGTTGAGATTGGCAAAGCAAATCTGCCCCAAAGTAGTGACTCTGGTGGAGCAGGAATCCAACACCAACCGGGTCCCCTTCTTCCCCCGTTTTGCTGAGACACTGGACTATTACTTGCCTGTTTTTGAGTCAATTGATGTAGTTCTGCCAAGGGAGCACAAGGAGAGGATCAATGTGGAACAACATTGTCTGGCTCGAGAACTCGTCAACTTAGTAGCATGTGAAGGGGCAGAAAGGGTGGAACGCCATGAGCCTTTGAGAACGTGGAGGTCGCGCTTTGCCATGGCTGGATTTAAGCCATATCCATTGAGCTCCTTCGTGAATTCTACCATCAAGAATCTACTGGAGAGCTACTGCGGAGATTATACTCTAGAAGAAAGAGACGGTGCACTATACCTTGGTTGGATGACTCGACCTCTTGTTGCCTCTTGTGCTTGGAGGTGA 1596 0.4637 METSAKHAYGSGRFYVEHQGYHSSDNTSQATTYSSVQTLEQHYTLESSSRTNSFPNHNNSPSSANFSPHDSPASQLESNSYALMPQQSLEIISGSLEDESCLTNDLDDLSHVIRELETAMRGTDTEILGMCDTVVPMESNQILSEAEKWKLTTDVASRGDLKEMLFACAKSMDANDIEITEYLMSEMRKMVSISGNPVQRIGAYMLESLVARMACSGSAIYKALKCKEPTGNELLSYMHLLFEICPYFKFGYLSANGAIAEAMKEENRVHIIDFQINQGSQWISLIQALAGRPGGPPALRITGFDDSFSNFARGGGLDIVRKRLTRLAQSCQVPFEFHAAGVAPSKVQLEDLKLQPGEAVAVNFAMMLHHVPDETVDSHNPRERLLRLAKQICPKVVTLVEQESNTNRVPFFPRFAETLDYYLPVFESIDVVLPREHKERINVEQHCLARELVNLVACEGAERVERHEPLRTWRSRFAMAGFKPYPLSSFVNSTIKNLLESYCGDYTLEERDGALYLGWMTRPLVASCAWR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5523g00007 531 MobiDBLite consensus disorder prediction 44 76 - -
Pral5523g00007 531 Pfam GRAS domain family 161 531 IPR005202 -
Pral5523g00007 531 ProSiteProfiles GRAS family profile. 152 531 IPR005202 -
Pral5523g00007 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 95 525 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5523g00007 Pral-Chr5523 47309 50307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5523g00007 1 531 GRAS Transcription Factor Family AT1G50600 56.052 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5523g00007 GRAS 4.4e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5523g00007 - - gmx:100785400 724.931