Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5523g00005 ATGGCTACCATTTCCACTTTCTACCCTTACAATCCCGTTCGACCTGCTTCTTCTCCGTCCTCTTTGTTTTCGAGTTTGCGCGGCTGGCATTTGGTCTCAAAATCTGCTCGTGGAAGGGGAGCACACAAGTTCGTGGTGCTTGCGGCGCATTCCAACCCTAAAGTTCTCAAGACTAATCGGAAATCGAGGTTCGGACAGACGCTATCTCCGTATGACAGCGATGAAGATGATGAAGCATTGGAGGACGATGACGAGGATGATGATGTGCTAGTTGATTGGCTATCTGATGAAGAATTTGCAGAGCCTGCTGACTTTAATTCTAATGACAAGAAATTTAAGTCACAGAAGATTGAAGTAAAAGGTAGGCGACAGGAAAAAGGATGGGATGCAAGATCATTTGAAAGCCCTAAAATGTTAAAAAGTGAGCAAGTGATATCCTTTGAACCAAATGGCAGTGTAAAGGCTGGTAGAAATTTAAGGGAGAACAGATATCCTCGATTGTCTGAAGAGATAAATTTGGACAAGAAATGGATTCCGCTTCTGGACTATTTAAGCACATTTGGAATGAAGGAGTCGCACTTTATCCAAATGTATGAAAGGCACATGTCCTCACTTCAAATTAATGTATGTTCTGCACAGGAAAGGGTAGAATACTTAATGAGTGTTGGAGTCAAGCATAGAGATGTAAGAAGAATCATTTTGAGACAGCCACAAATTCTGGAGTATACAGTGGAGAAAAATTTGAAGGCCCATGTTGCATTTTTGATGGGTTTGGGAATACCAACTTCCAGAGTAGGGCAAATCATTGCTGCTGCTCCATCCCTGTTTTCTTATAGTGTTGAAAATTCTTTAAAACCAACAGTAAGATATTTAGTTGAGGAAGTTGGCATCAAGGAAAAGGATCTGAGTAAAGTCATTCAACTGAGCCCACAAATTCTAGTTCAGCGTATTGACATTTCCTGGAATATTCGGTATATGTTTCTAACCAAAGAGTTGGGAGCACCCAGAGATAGCGTAGTGAAGATGGTGACAAAACATCCTCAACTTCTCCATTATAGCATTGATGATGGATTGCTGCCTAGGATTAACTTTCTGAGGAGCATAGGAATGAGAAATTCAGACATCCTGAAAGTCATAACTAGTCTTACTCAGGTCCTTTCCCTGTCCCTGGAGGAGAATCTAAAGCCCAAGTACTTGTATCTGGTAAATGAACTTCAGAATGAGGTTCAATCCTTGACCAAATATCCAATGTACCTTAGCTTGTCGTTGGACCAGAGAATACGTCCTCGTCATAGGTTCTTGGTTTCTCTGAAGAAAGCTCCAAAAGGACCATTCCCCCTTGGATCACTGGTCCCAACTGATGAATGCTTCTGTCAGCAGTGGGCGGGGACTAGTTTGGACAAGTATTTGGCTTTTCGCCAGAGGCTTTTACTCAAGAAATTTGCTGAAAAATATGAAAAATCAAAATAA 1470 0.415 MATISTFYPYNPVRPASSPSSLFSSLRGWHLVSKSARGRGAHKFVVLAAHSNPKVLKTNRKSRFGQTLSPYDSDEDDEALEDDDEDDDVLVDWLSDEEFAEPADFNSNDKKFKSQKIEVKGRRQEKGWDARSFESPKMLKSEQVISFEPNGSVKAGRNLRENRYPRLSEEINLDKKWIPLLDYLSTFGMKESHFIQMYERHMSSLQINVCSAQERVEYLMSVGVKHRDVRRIILRQPQILEYTVEKNLKAHVAFLMGLGIPTSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLSKVIQLSPQILVQRIDISWNIRYMFLTKELGAPRDSVVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSDILKVITSLTQVLSLSLEENLKPKYLYLVNELQNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLKKFAEKYEKSK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5523g00005 489 PANTHER CGI-12 PROTEIN-RELATED 212 460 IPR003690 GO:0003690|GO:0006355
Pral5523g00005 489 FunFam Transcription termination factor MTERF9, chloroplastic 241 476 - -
Pral5523g00005 489 Gene3D Transcription termination factor 3, mitochondrial 239 476 IPR038538 -
Pral5523g00005 489 MobiDBLite consensus disorder prediction 60 82 - -
Pral5523g00005 489 SMART mt_12 303 335 IPR003690 GO:0003690|GO:0006355
Pral5523g00005 489 SMART mt_12 409 440 IPR003690 GO:0003690|GO:0006355
Pral5523g00005 489 SMART mt_12 230 261 IPR003690 GO:0003690|GO:0006355
Pral5523g00005 489 SMART mt_12 266 298 IPR003690 GO:0003690|GO:0006355
Pral5523g00005 489 SMART mt_12 340 371 IPR003690 GO:0003690|GO:0006355
Pral5523g00005 489 SMART mt_12 376 408 IPR003690 GO:0003690|GO:0006355
Pral5523g00005 489 Pfam mTERF 175 256 IPR003690 GO:0003690|GO:0006355
Pral5523g00005 489 Pfam mTERF 244 436 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5523g00005 Pral-Chr5523 30440 33761 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral5523g00005 mTERF 3.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5523g00005 K15031 - gmx:100809638 697.967