Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5520g00079 ATGGAGAGGATCATTGGAGGGAGGTTTAAGATGGGTCGGAAGATAGGTAGCGGCTCCTTCGGCGAAATTTATATTGCTGCCGATATTCAGACATCCGAGATTGTAGCGATGAAGATGGAGAGCAGGAAGACTAAACACCCGCAACTACTTTATGAGGCCAAGTTATATAATGCCCTTCAAGGAGGAAGTGGTGTTCCAAGCATGAAATGGCATGGTATTGATGGAGACAATAACGTTTTAGTTATGGATCTTTTGGGACCGAGTCTTGAGGATCTTTTCGTATACTGTGGAGGGAAGTTTTCATTGAAAACAGTTTTGATGCTGGCTGATCAGATGCTTGCAAGGATAGAGCATTTACATTCAAAGGGATTTTTGCATAGAGACATCAAACCAGATAACTTCCTTATGGGTCTAGGGAGAAAAGCAAATCAGGTTTATATGATTGATTTTGGACTTGCAAAAAGATACAAGGATCCCACAACCAATAAGCATATTGCTTACAGAGAGAACAAAAATTTAACAGGCACTGCCCGCTATGCGAGTTGCAATACTCATTTAGGAATTGAGCAAAGTAGACGGGATGATCTGGAGTCTCTTGGTTATGTTCTTCTTTACTTCTTGAGAGGAAGCCTTCCATGGCAGGGTCTGAGAGCTGCCACTAAAAAGCAAAAGTACGACAGGATCTGTGAGAAGAAGCTATCCACTCCAATTGAGATCCTCTGCAAGTCTTATCCTGCGGAGCTTGCTTCCTACTTCCATTATTGCCGCTCTTTGACATTTGATCAACGCCCAGATTATGGATTCTTGAGGCGCCTGTTTCGTGATTTATTTACTCGTGAAGGATACGAGTCTGACTACATATATGACTGGACCATTCTTAAATATCAGCAATCGCAACAGACAAAGATGAAGGATCAATCAACTCCTGCCGTTGATGTGCCTAACCGTATTGAACCAAATGTTGTGGATAAGAATAAAGGTGTTAACGGCTCTGCTCAAATTGCGGAGGCAAGACCATTAACAAATGTTAATGCACGCGTTAATATGCAAATCAGAGCATCGCACGATGATCAGAATCTGAATGCAGAGGATCAGGTTGTGAAACTTCCTGTGAAAAATGGTCCATCTACATCTGCGAGGCCCAGAATCTCAGAAAATGTGTCGAAAGCAGAGAAACCAATAGGAAGCTCAAACCCGGGTCGTGTATTTGGGCATAACACTGGCACTTCAAGCAGCTGGATTCCTTCGCTACGCAGAATTTCTTCGGCCAAAAAATAG 1278 0.428 MERIIGGRFKMGRKIGSGSFGEIYIAADIQTSEIVAMKMESRKTKHPQLLYEAKLYNALQGGSGVPSMKWHGIDGDNNVLVMDLLGPSLEDLFVYCGGKFSLKTVLMLADQMLARIEHLHSKGFLHRDIKPDNFLMGLGRKANQVYMIDFGLAKRYKDPTTNKHIAYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLRAATKKQKYDRICEKKLSTPIEILCKSYPAELASYFHYCRSLTFDQRPDYGFLRRLFRDLFTREGYESDYIYDWTILKYQQSQQTKMKDQSTPAVDVPNRIEPNVVDKNKGVNGSAQIAEARPLTNVNARVNMQIRASHDDQNLNAEDQVVKLPVKNGPSTSARPRISENVSKAEKPIGSSNPGRVFGHNTGTSSSWIPSLRRISSAKK 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5520g00079 425 PANTHER CASEIN KINASE-RELATED 13 334 - -
Pral5520g00079 425 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pral5520g00079 425 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00079 425 FunFam Casein kinase I isoform delta-like 1 339 - -
Pral5520g00079 425 MobiDBLite consensus disorder prediction 371 425 - -
Pral5520g00079 425 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Pral5520g00079 425 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00079 425 MobiDBLite consensus disorder prediction 400 425 - -
Pral5520g00079 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral5520g00079 425 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00079 425 Gene3D Transferase(Phosphotransferase) domain 1 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5520g00079 Pral-Chr5520 361203 367435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5520g00079 9 236 AGC Kinase Gene Family AT3G08720 26.609 2.78e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pral5520g00079 Pkinase 5.8e-27 CL0016