Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5520g00069 ATGGCGCAACCTGAAACGAAGTGGTGCGTCACGTTTATTTGTGTACTCATCATCATGTTGATGATGATGATGAACTTTGTGGCGTGCAATGAGAAAGAAGAAGGCGAGCTTCTATTGTCGTTCAAGGCTTCCATTAACGACCCACTTCACCATCTCTCGAGCTGGGTCAATTCCTCTTCCGCTAGTATCTGCCACTGGAACGGTGTCACCTGCGACAGTAACTCCAACGTTCGAGCCATAAACCTCTCCTCCAAAAACATCTCCTCCAATAATATATCCTCATTCTCCATTTTTCAACTTCCACACCTTGAACACATTGACCTCTCCGACAATCAGCTCTCTGGGGGAATCTCTTTCTCTCTCTCTTCGCTTGTCTATCTCAATCTTAGCAACAACAATTTCACAGGTCCTGTCCCATTGTCGTTTTCCCGCATCCAAATTCTGGATCTCTCCAACAACATGTTTTCCGGGGAGATATCCCATCAAATTGGATCGCTTACGAGGCTGAGGTATGTTGATCTGGGAGGCAACGCTTTGGTGGGAAAGATTCCTGATTCCATCACTAACATGACAGGTTTAGAGTACTTGACCTTGGCTTCCAACCAGCTCGTGGGTGAAATCCCTCCAAAAATTGGCCTCATGAAGAGCTTGAAGTGGATATATTTCGGGTACAACAATCTCTCGGGTGAGATTCCACAGGGAATCGGAGCATTGACGAATTTGAATCATCTTGATCTTGTTTACAACAACCTCACGGGACACATTCCCGACTCTCTGGGAAACCTCACTAATCTCGAGTATCTTTTTCTCTACCAAAACAAGCTGACAGGTCGAATTCCACCATCTGTTTTTGAGCTTAAAAAGCTTGTTTCGCTTGATCTCAGTGACAATTTTCTGGCTGGTGAGATTCCGGAGCTCGTAATTCAGCTTCAGAGAGTAGAGATTCTACACCTTTTCTCCAACAACTTAACCGGTAGGATTCCAACCGCTATAACCTCTCTGCCTCGCCTCCAAGTTCTTCAGCTATGGTCTAACGGATTAACGGGTGAGATTCCAGAAGATTTGGGAAAGCATAATAACCTTACGGTTCTGGACCTTTCCACCAACAAACTTTCTGGGAAAATCCCAGATAGCTTATGTCGCTCGGGCGCTCTTTCCAAGCTTATCCTTTTCTCCAACTCTCTTCAAGGGGAAATACCAAATAGCTTAACCACTTGCACAAGCTTGCGCCGAGTTCGTCTCCAGAACAACAAGTTCTCCGGTGAATTACCGTCCCGGCTAACTCAACTGTCACAGGTATATCTATTGGACATCTCCGGTAACCGACTCTCCGGCAGGATTGATGATAGGCAGTGGAGTATGCCGTCGCTTCAAATGCTGAATTTGGGTAACAACAACTTCTCCGGTGAGCTACCGACCACTTTTGGTAGTAAAAAATTGGAGAAACTGGACTTATCCGAAAATGGATTTTCTGGTTATATTCCACATGGGTTTGGAGGCTTATCGGAGCTGATGCAATTGAACCTGAGCAATAACAACCTCTATGGTGATATCCCACAAGAGCTCACTTTGTTCAGGAAGCTAGCTTTAGATGTTAGCCACAATCAACTCACTGGCCAAATTCCGGCAAGTCTCGGCGACTTGCCGATTCTGAGCTTTCTGGATTTGTCGGATAACCAATTGTGGGGTCAAATTCCAGAGAATTTAGGCAGAGTGGAATCTCTTGTGCAGGTGAACATATCCTACAACCATTTTCATGGACATTTACCGGCCACTGGAGCTTTCCTTGCAATTAATGCCAGCGCGGTCACTGGCAACGACCTCTGTGGTGGTTCCGGCGACACTTCAAGGGGGTTGCCGCCTTGTAAAAAAAGCGATAGGAATCCATGGTTTGTCCTACTGTGGTTTGTGGTCGGATTTGCGGCGTTTGCATTAGCAGCCTCTCTAGTTACTTGTTCTCGTCGAAGGAGGCATTCGGAGCTTAAGAGAGTGGAAAGCGAAGATGGTACCTGGGAGATTCAGTTCTTCCATTCCAAGTTTGCCAAATTGATCACAATGGACGATGTTTTGTCGTCAGCCAAAGCAGGAAATGTGATCTCTAAGGGAAGAACTGTTTCATACGAAGGGAAGTGCATGGCAAGTGGCATGCAATTCGAGGTGAAGGAAATCAGGGACTTAAATTCAGTTCCGTTGAGTTTCTGGGAAGACATGGTGGAGCTGGGTAAGGAGCAGCATCCAAACATTTTTAAATTGACGGGACTATGTCGTTCGGGAAAAGGAGCATTTTTGCTGTATGAGGATGCAGAAGGAAAGAGTTTAAGCCAAGTAGTGAGAAACTTGAGCTGGGAAAGGCGACGGAAAATCGCCGTGGGGATTGCAAAAGCACTGAAGTTTCTGCATGCTCAATGCTCGTCAGTTATTTTTGTCGGTGAGATGTCGCCGGAAAGCGTTTTCATCGACGGCGACGACATTCCACGCTTGAAGCTGAGCCCTCTGGCATTGCCGAAGGGCTCCATTTCTTCTCCCTACGTTGCCCCAGAAGCAAGGAATGGGAAGGACGTGACAGAGAAGAGCGACGTATATGGATTTGGTGTTATTGTGATAGAATTGTTGACGGGAAGAAGTGCGGCGGAGGAGGAGGAGGGGGGCATAGTGGAGTGGGCCCGATATTGCTATTCGGATTGTCATTGGGAAACGTGGGTCGACCCGACAATGAAGGGTGGGAAGCAGAACGACATCGTAGAGACCATGAACCTGGCGCTGCACTGCACCGCCATGGATCCCACAGCAAGGCCATGCGCAAGCGACGTCTTCAAAGCCCTCTCTGCACACTCCGTGCTGTGTGTTTCCGCACTCCAACCATGA 2865 0.4736 MAQPETKWCVTFICVLIIMLMMMMNFVACNEKEEGELLLSFKASINDPLHHLSSWVNSSSASICHWNGVTCDSNSNVRAINLSSKNISSNNISSFSIFQLPHLEHIDLSDNQLSGGISFSLSSLVYLNLSNNNFTGPVPLSFSRIQILDLSNNMFSGEISHQIGSLTRLRYVDLGGNALVGKIPDSITNMTGLEYLTLASNQLVGEIPPKIGLMKSLKWIYFGYNNLSGEIPQGIGALTNLNHLDLVYNNLTGHIPDSLGNLTNLEYLFLYQNKLTGRIPPSVFELKKLVSLDLSDNFLAGEIPELVIQLQRVEILHLFSNNLTGRIPTAITSLPRLQVLQLWSNGLTGEIPEDLGKHNNLTVLDLSTNKLSGKIPDSLCRSGALSKLILFSNSLQGEIPNSLTTCTSLRRVRLQNNKFSGELPSRLTQLSQVYLLDISGNRLSGRIDDRQWSMPSLQMLNLGNNNFSGELPTTFGSKKLEKLDLSENGFSGYIPHGFGGLSELMQLNLSNNNLYGDIPQELTLFRKLVXLDVSHNQLTGQIPASLGDLPILSFLDLSDNQLWGQIPENLGRVESLVQVNISYNHFHGHLPATGAFLAINASAVTGNDLCGGSGDTSRGLPPCKKSDRNPWFVLLWFVVGFAAFALAASLVTCSRRRRHSELKRVESEDGTWEIQFFHSKFAKLITMDDVLSSAKAGNVISKGRTGXSYEGKCMASGMQFEVKEIRDLNSVPLSFWEDMVELGKEQHPNIFKLTGLCRSGKGAFLLYEDAEGKSLSQVVRNLSWERRRKIAVGIAKALKFLHAQCSSVIFVGEMSPESVFIDGDDIPRLKLSPLALPKGSISSPYVAPEARNGKDVTEKSDVYGFGVIVIELLTGRSAAEEEEGGIVEWARYCYSDCHWETWVDPTMKGGKQNDIVETMNLALHCTAMDPTARPCASDVFKALSAHSVLCVSALQP 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5520g00069 956 FunFam Leucine-rich repeat receptor protein kinase EMS1 233 317 - -
Pral5520g00069 956 SUPERFAMILY Protein kinase-like (PK-like) 684 943 IPR011009 -
Pral5520g00069 956 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 318 619 - -
Pral5520g00069 956 Pfam Leucine rich repeat 475 514 IPR001611 GO:0005515
Pral5520g00069 956 Pfam Leucine rich repeat 240 297 IPR001611 GO:0005515
Pral5520g00069 956 Pfam Leucine rich repeat 335 395 IPR001611 GO:0005515
Pral5520g00069 956 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Pral5520g00069 956 Gene3D Ribonuclease Inhibitor 144 231 IPR032675 -
Pral5520g00069 956 Gene3D Ribonuclease Inhibitor 31 143 IPR032675 -
Pral5520g00069 956 Gene3D Phosphorylase Kinase; domain 1 656 768 - -
Pral5520g00069 956 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 658 769 - -
Pral5520g00069 956 SMART LRR_typ_2 334 358 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 360 382 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 549 573 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 501 525 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 454 477 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 238 261 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 121 144 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 166 189 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 262 286 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 100 120 IPR003591 -
Pral5520g00069 956 SMART LRR_typ_2 190 214 IPR003591 -
Pral5520g00069 956 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Pral5520g00069 956 SUPERFAMILY L domain-like 215 596 - -
Pral5520g00069 956 FunFam Leucine-rich repeat receptor protein kinase EMS1 140 232 - -
Pral5520g00069 956 Pfam Protein kinase domain 699 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00069 956 Gene3D Transferase(Phosphotransferase) domain 1 771 950 - -
Pral5520g00069 956 Gene3D Ribonuclease Inhibitor 331 630 IPR032675 -
Pral5520g00069 956 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 385 944 - -
Pral5520g00069 956 SUPERFAMILY RNI-like 64 304 - -
Pral5520g00069 956 ProSiteProfiles Protein kinase domain profile. 694 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00069 956 Gene3D Ribonuclease Inhibitor 232 330 IPR032675 -
Pral5520g00069 956 PRINTS Leucine-rich repeat signature 361 374 - -
Pral5520g00069 956 PRINTS Leucine-rich repeat signature 501 514 - -
Pral5520g00069 956 Pfam Leucine Rich Repeat 102 124 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5520g00069 Pral-Chr5520 283768 287400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5520g00069 15 943 Receptor kinase-like Gene Family AT2G25790 52.947 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Pral5520g00069 Pkinase 2.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5520g00069 - - gmx:100777118 1190.64