Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5520g00064 ATGCCTGAACTGCGTAGCAGAGCGCGCAGGAACTGGGCATTACATAACCCAATCCCTAAGCCGATTACCAAACCCCATCAGCCCACGGTAAGAACTCGTCAGAGGAGGAGAACCAACGTGCAGAACAGGGAGAATCCGCAGCAGAAGAACACGATCGGGGTTGAAGAAACTAATTATATTGTGAGCAAGGACGTTGGCGCCATTCCTGAAAGGAGGACGTTGGGAGATAAGGAAGGGAAAGAACAGGGACAAGCGCCAGACGCAAAGCTTAGGGTTTTGAGAGAGAACGTTGGGGATAAAGCCATGGATGATTATGAGAGTGGTGGCCATAGTCCCGATAAGGCTCCGGCTGCCGAAGACGAGGGCTGCACCGCTCCGTTACCAGAGAAGGTCCAGGTTGGTGGTTCACCAGTATATAGAATTGATAGAAAATTGGGAAAAGGAGGATTTGGACAAGTCTATGTTGGCAGGCGTGTTGTTGCAACAAATCCCATTGAACTGACTGGTCCTGGAGCTGTGGAGGTGGCCTTAAAGTTTGAGCATAGAAGCAGTAAAGGCTGCAACTATGGACCACCATACGAGTGGCAGGTTTACAATGTGTTGGGAGGTAGTCACGGTGTTCCGCGAGTTCATTATAAGGGGAGGCAAGGTGATTACTATGTCATGGTAATGGATATGCTTGGCCCTAGTCTATGGGACGTGTGGAATAACAACTCTCATGCGATGTCTATAGAAATGGTAGCTTGTATTGCCATTGAGGCAATATCCATATTAGAGAAGATGCATTCTAGAGGCTATGTTCACGGTGATGTAAAACCTGAGAACTTCTTGCTTGGCTCCCCTGGAACTACTGATGAGAAGAAGCTGTTTCTTGTCGATCTGGGACTTGCTACCAGATGGCGCGATAGTTCAACAGGCCTTCATGTTGAGTATGATCAACGCCCAGATGTATTTAGGGGGACAGTACGATATGCTAGTGTGCATGCTCATCTTGGTAGAACTGGCAGCAGAAGAGATGATTTGGAATCTCTTGCTTATACACTGATCTTCCTACTTCGTGGTCGGCTTCCGTGGCAAGGATATCAGGGAGATAACAAAGGATTCCTTGTCTGCAAGAAGAAGATGGCCACATCCCCAGAAACTTTGTGCTGTTTTTGTCCTCAACCCTTTCGACAGTTTGTTGAGTATGTTGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAGTACATCTCCCTTTTTGATGGAATTGTTGGCCCGAATCCGGACATCAGGCCAATAAATACTGAGGGCGCTCAGAAGCTTATATGTCAGGTTGGTCATAAGAGAGGACGATTGACCATAGAAGATGACGACGATGAACAACCTAAGAAGAAGGTCAGAATGGGAATGCCAGCAACTCAATGGATCAGTGTTTACAATGCTCGTCGACCAATGAAGCAAAGGTATCATTACAATGTGGCAGACATGCGCCTGTCTCAACACATTGAGAAAGGAAATGAGGATGGGTTATTTATAAGCAGCGTGGCTTCTTGTTCTAATCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCTCTTCACAAGTTTATGAACTCTCACCGTATTTTCTTCATAAGGATTGGATTATGGAACAATGGGAAAAAAATTATTACATCAGTGCTATAGCAGGGGCTAATAATGGAAGCTCATTGGTTGTAATGTCTAAAGGGACCCAGTACGTGCAGCAGTCCTATAAAGTGAGTGATTCATTTCCATTCAAGTGGATTAATAAAAAATGGAGAGAGGGCTTTTACGTCACTGCCATGGCAACTGCTGGAAGTAGATGGGCTATTGTCATGTCCCGTGGTGCAGGATTTTCAGATCAGGTTGTGGAACTTGATTTCCTGTATCCCAGTGAAGGTATTCATCGGAGGTGGGATGGTGGTTACCGAATCACATCTACTGCTGCAACATGGGACCAAGCTGCTTTTGTTCTGAGCGTCCCAAGAAGAAAACCAGCTGATGAAACTCAAGAGACGCTTCGCACATCTGCTTTCCCTAGTACTCATGTTAAGGAAAAGTGGGCCAAAAACTTGTACATAGCATCTATTTGTTATGGGAGAACAGTTTCATGA 2121 0.455 MPELRSRARRNWALHNPIPKPITKPHQPTVRTRQRRRTNVQNRENPQQKNTIGVEETNYIVSKDVGAIPERRTLGDKEGKEQGQAPDAKLRVLRENVGDKAMDDYESGGHSPDKAPAAEDEGCTAPLPEKVQVGGSPVYRIDRKLGKGGFGQVYVGRRVVATNPIELTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHAMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGSPGTTDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGDNKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTIEDDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFSSQVYELSPYFLHKDWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDGGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5520g00064 706 MobiDBLite consensus disorder prediction 69 117 - -
Pral5520g00064 706 PANTHER CASEIN KINASE-RELATED 139 672 - -
Pral5520g00064 706 Pfam Protein kinase domain 139 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00064 706 SUPERFAMILY Protein kinase-like (PK-like) 139 419 IPR011009 -
Pral5520g00064 706 ProSiteProfiles Protein kinase domain profile. 139 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00064 706 Gene3D Transferase(Phosphotransferase) domain 1 111 449 - -
Pral5520g00064 706 ProSitePatterns Protein kinases ATP-binding region signature. 145 178 IPR017441 GO:0005524
Pral5520g00064 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Pral5520g00064 706 MobiDBLite consensus disorder prediction 43 57 - -
Pral5520g00064 706 FunFam casein kinase 1-like protein HD16 112 462 - -
Pral5520g00064 706 MobiDBLite consensus disorder prediction 1 121 - -
Pral5520g00064 706 SMART serkin_6 139 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00064 706 CDD STKc_CK1 139 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5520g00064 Pral-Chr5520 254930 261237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5520g00064 258 415 MAP Kinase Kinase Kinase AT5G50180 26.250 2.84e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pral5520g00064 Pkinase 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5520g00064 - - zju:107420390 1239.17