Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5520g00038 ATGGCGATTGCAGCAGAGACTCAGCCTCAGCCCCCATCTTATGACAAGGCTTCTTCTGAGGCTTCTGCTGTGGAGAATAGAAGGTGGACCCTCAACGACTTTGATATTGGAAAGCCTCTTGGAAGGGGAAAATTTGGGCATGTCTATTTGGCCAGAGAAAAGAGAAGTAATCACATTGTTGCTCTGAAAGTCCTCTTCAAGAGCCAATTGCAACAGTCCCAAGTTGAGCATCAACTTAGGCGAGAAGTTGAAATCCAAAGTCATCTGCGACATCCCAACATTTTACGCCTTTATGGATACTTTTATGATCAGAAACGCGTTTATTTGATTTTAGAGTACGCCCCAAAAGGTGAACTTTACAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACGTGCAGCTACTTATGTTGCTTCATTGGCCCGAGCCCTCATATATTGCCATGGAAAGCATGTAATACATAGAGACATTAAACCTGAGAACCTTCTTATTGGCGCCCAGGGTGAACTGAAAATTGCAGACTTTGGGTGGTCGGTGCACACATTTAACCGCAGGCGGACCATGTGTGGCACACTAGATTATCTTCCTCCTGAAATGGTGGAGAGTGTAGAACATGATGCAAGCGTTGATATATGGAGCCTTGGCGTCCTGTGTTATGAGTTTCTATATGGAGTCCCTCCTTTTGAGGCTAAAGAACATTCTGAGACATACAGAAGAATAATCCAAGTGGATCTCAAGTTTCCTCCCAAACCAATTGTGTCCTCTGCTGCAAAGGACCTCATCAGCCAGATGCTGGTGAAGGATTCCTCTCAACGTCTACCATTACACAAGCTTCTGGAACATCCGTGGATTGTTCAGAACGCAGAGCCCTCTGGTGTATACAAATGCTAG 894 0.4452 MAIAAETQPQPPSYDKASSEASAVENRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSETYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGVYKC 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5520g00038 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Pral5520g00038 297 PIRSF ILK 5 282 - -
Pral5520g00038 297 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 14 295 IPR030616 GO:0004672
Pral5520g00038 297 Gene3D Transferase(Phosphotransferase) domain 1 118 294 - -
Pral5520g00038 297 SUPERFAMILY Protein kinase-like (PK-like) 21 289 IPR011009 -
Pral5520g00038 297 MobiDBLite consensus disorder prediction 1 21 - -
Pral5520g00038 297 SMART serkin_6 34 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00038 297 FunFam Aurora kinase A 26 117 - -
Pral5520g00038 297 FunFam serine/threonine-protein kinase Aurora-1 118 293 - -
Pral5520g00038 297 CDD STKc_Aurora 33 286 - -
Pral5520g00038 297 ProSiteProfiles Protein kinase domain profile. 34 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00038 297 Pfam Protein kinase domain 36 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00038 297 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Pral5520g00038 297 Gene3D Phosphorylase Kinase; domain 1 22 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5520g00038 Pral-Chr5520 185112 188148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5520g00038 25 296 CBL-interacting serine-threonine protein kinases AT5G10930 35.842 2.60e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Pral5520g00038 Pkinase 5.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5520g00038 K08850 - qsa:O6P43_015468 575.859