Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5520g00008 ATGCTGCCCAATATCGATCCACTCAAACATTCCATCTTATATACATCTCTCCCTCATCTCCTTCCTTGCAACCTTTACCGTAACTACCAGCGTACGGACCCGTCTCTCTGTCCTCGCAACATGGATCGCCACTCCATCTTCTTTCTTTTTGGACTCATGTTTTCATTGTCTCTTGCATCACAAGCCATCAGCGACGGACATTTACAGTTTTTTTCTTTAATGAAGAAGTCTCTCTCAGGGAAATACCCGATAAATTGGGATGTCACAGAAGGAAAACCTATCTGCAACTTCACAGGAGTTGTGTGCAACAACCAAAGGGAAGTGATCAATCTTGACATCTCCGGTTGGTCACTTGCCGGAAACTTCCCTCCAGATATATGCTCCTATCTGCCAGAGTTACGTTTTCTACGTCTCGGCCACAATCGTTTGAGAGGAAAATTCCTTGATAGCATCATCAACTGTTCTCACTTGGAAGAGCTTAACATGAATCATGTGTATCATACAGGAACCCTTCCAGATTTCTCACCTATGAAATCTCTAAGGATCCTGGATTTGTCATACAACTCCTTCACAGGTCAGTTCCCGATGTCGGTATTTAATCTTACCAATCTTGAGGTGCTTAACTTCAATGAGAACGCTGGTTTCAACTTATGGGAGCTGCCGGAGGATATGTATAGGATGAAAAACCTCAAGTCTGTGATCTTGACGACATGCATGGTGCGTGGCCGAATCCCTGCATCCATAGGAAACGTTTCGACTCTGGTTGATCTTGAATTGAGTGGAAATTTTCTCACGGGTCAAATTCCTGCAGAGCTCGGAATGCTGAAAAACTTGCAGCAGCTTGAGCTTTACTACAACCAACTTATTGGCAATATACCGAAGGAGCTAGGCAATCTTACGGAGCTCAGAGACTTGGACATGTCAGTCAATAAGCTGTCGGGAAGTATCCCAGAATCTGTGTGTCGTCTTCCCAAGCTTGAAGTCTTGCAGCTATACAACAATAGTCTCACAGGAGAAATCCCAGGTGTAATAGCAAACTCAAAAACCTTAAGAATATTATCTCTTTATGACAATTTTTTGACCGGAGAAGTCCCAAGAAAGCTGGGTCAGTTCTCAGGAATGGTAGTTCTAGATTTATCCGAGAACAAACTGTCTGGTCCGTTGCCAACAGAGGTTTGCAAGGGAGGTAAACTGATGTACTTCCTTGTTCTGGATAACAAGTTTTCTGGAGAGCTACCTGACAGTTATGCAGAGTGCTGGACAATGTTAAGGTTTCGAGTCAGTAATAACCATTTGGTTGGCTCAATTCCCGAAGGGCTCCTTGGTCTCCCGCACGTTTCCATAATTGATTTGAGTAGCAATAATTTAAGTGGTCCAATTTCCGAGACTATTGGAAATCCTAGAAACTTGTCAGAACTATTCATACAGAAGAATAGGATTTCAGGCGTTATTCCTCCGACCATCTCTCGAGCTACCAATCTGGTCAAAATTGATTTCAGCAACAACCTTTTGTCCGGTCCAATACCTTTCGAAATCGGCAATCTTAAAAGGCTGAATTTGCTGATGTTGCAAGGGAATAGGCTGAATTCTTCCATCCCCAGCTCACTTTCCTTATTGAAGTCCCTCAACGTTCTTGATCTCTCCAACAACCTTTTGACCGGTAGCATCCCTGAAAGCTTCTCTGATCTGCTACCGAACTCGATCAACTTTTCAAATAACTTGCTCTCTGGTCCAATTCCTACATCGTTGATAAAAGGAGGTTTAGTCGAAAGTTTCTCAGGGAATCCTGGTCTGTGTGTACCTGTCTATGCTAACTCATCGGATCAAAATTTTCCCATATGTTCAAGGACTAGCAACAAGAAGAGGCTAAGCACTTTCTGGGTAGCAGGGATTTCAGTGGTTTTGATCATAACTGGAGCAGCCTTGTTTTTGAAACGTAGATGCAGCAAAGAGAGAGCTGCAGTGGAACATGACGAAACACTGTCTTCGTCATTCTTCTCTTATGAAGTGAAGAGCTTTCACAGGATAACAATTGACCAACGGGAGATCGTGGAGGCCATGGTCGAAAAGAATATAGTGGGGCATGGAGGGTCTGGTACAGTGTACAAGATCGAGTTAAAAAGCGGTGAATTTGTTGCTGTGAAGCGGCTATGGGGTCGAAAGTCAAAGAACTCGGTTCCAGATCAGGATAGTTTAGCTTTAGACAAGACATTGAAAACTGAGGTGGAGACCCTGGGAAATATAAGACACAAGAACATAGTGAAGCTGTACTGCTACGTCTCGAGTTTGGATTGCAGATTGTTAGTTTACGAGTACATGCCAAATGGTAATCTTTGGGATGCTCTACACAAAGGTTCGGTCCACTTGGATTGGCCTACTCGCCATAAGATTGCACTGGGGACCGCACAGGGTCTGGCATACCTCCACCATGATTTGCTCCCTCCTATAATTCATAGAGACATCAAGTCAACTAACATCCTTCTCGACGTTGATTACCAACCCAAGGTTGCAGATTTCGGGATTGCCAAGGTATTGCAGGCAAGAGGAGGAAAGGACTCCACATCTACAGTTATTGCAGGCACATATGGTTACTTGGCACCAGAATTTGCTTATTCTACCAGAGCAACTGTCAAGTGCGATGTCTATAGTTTTGGGGTGATTTTAATGGAACTGATAACTGGGAAGAAGCCTGTGGAGGCAGAATTTGGAGAGAACAGAAACATCGTATACTGGGTTTCAAACAAAGTCGACAGCAAGGAAGGGGCTAGCGAGGTATTAGACAAGCGATTAGAAGGGTCTTACAAAGAGGAAATGATTCAGGTGCTCCGAATTGCCATCCGTTGCACCTACAAGGCTCAAGCTCTTCGACCGACCATGAAAGAGGTAGTTCAAGTGCTGATTAAGGCAGACCCATCTAGCAAATTGTCCAATAAGACCAAAGAAACATCAAATGCCACTTTGACAAAGAACTCATCATTTGAACTGTAG 2988 0.4381 MLPNIDPLKHSILYTSLPHLLPCNLYRNYQRTDPSLCPRNMDRHSIFFLFGLMFSLSLASQAISDGHLQFFSLMKKSLSGKYPINWDVTEGKPICNFTGVVCNNQREVINLDISGWSLAGNFPPDICSYLPELRFLRLGHNRLRGKFLDSIINCSHLEELNMNHVYHTGTLPDFSPMKSLRILDLSYNSFTGQFPMSVFNLTNLEVLNFNENAGFNLWELPEDMYRMKNLKSVILTTCMVRGRIPASIGNVSTLVDLELSGNFLTGQIPAELGMLKNLQQLELYYNQLIGNIPKELGNLTELRDLDMSVNKLSGSIPESVCRLPKLEVLQLYNNSLTGEIPGVIANSKTLRILSLYDNFLTGEVPRKLGQFSGMVVLDLSENKLSGPLPTEVCKGGKLMYFLVLDNKFSGELPDSYAECWTMLRFRVSNNHLVGSIPEGLLGLPHVSIIDLSSNNLSGPISETIGNPRNLSELFIQKNRISGVIPPTISRATNLVKIDFSNNLLSGPIPFEIGNLKRLNLLMLQGNRLNSSIPSSLSLLKSLNVLDLSNNLLTGSIPESFSDLLPNSINFSNNLLSGPIPTSLIKGGLVESFSGNPGLCVPVYANSSDQNFPICSRTSNKKRLSTFWVAGISVVLIITGAALFLKRRCSKERAAVEHDETLSSSFFSYEVKSFHRITIDQREIVEAMVEKNIVGHGGSGTVYKIELKSGEFVAVKRLWGRKSKNSVPDQDSLALDKTLKTEVETLGNIRHKNIVKLYCYVSSLDCRLLVYEYMPNGNLWDALHKGSVHLDWPTRHKIALGTAQGLAYLHHDLLPPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTSTVIAGTYGYLAPEFAYSTRATVKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDSKEGASEVLDKRLEGSYKEEMIQVLRIAIRCTYKAQALRPTMKEVVQVLIKADPSSKLSNKTKETSNATLTKNSSFEL 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5520g00008 995 SUPERFAMILY L domain-like 322 581 - -
Pral5520g00008 995 ProSiteProfiles Protein kinase domain profile. 687 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00008 995 SMART LRR_typ_2 323 346 IPR003591 -
Pral5520g00008 995 SMART LRR_typ_2 130 155 IPR003591 -
Pral5520g00008 995 SMART LRR_typ_2 275 299 IPR003591 -
Pral5520g00008 995 SMART LRR_typ_2 371 395 IPR003591 -
Pral5520g00008 995 SMART LRR_typ_2 201 227 IPR003591 -
Pral5520g00008 995 SMART LRR_typ_2 539 562 IPR003591 -
Pral5520g00008 995 Pfam Leucine Rich Repeat 542 562 IPR001611 GO:0005515
Pral5520g00008 995 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 773 984 - -
Pral5520g00008 995 SUPERFAMILY RNI-like 106 409 - -
Pral5520g00008 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Pral5520g00008 995 FunFam receptor protein-tyrosine kinase CEPR1 670 772 - -
Pral5520g00008 995 MobiDBLite consensus disorder prediction 974 995 - -
Pral5520g00008 995 Gene3D Transferase(Phosphotransferase) domain 1 773 993 - -
Pral5520g00008 995 FunFam Receptor protein-tyrosine kinase CEPR1 323 608 - -
Pral5520g00008 995 SMART serkin_6 687 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00008 995 Gene3D Ribonuclease Inhibitor 216 321 IPR032675 -
Pral5520g00008 995 Gene3D Ribonuclease Inhibitor 68 215 IPR032675 -
Pral5520g00008 995 Gene3D Ribonuclease Inhibitor 333 610 IPR032675 -
Pral5520g00008 995 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524
Pral5520g00008 995 PANTHER LEUCINE RICH REPEAT KINASE 2 226 971 - -
Pral5520g00008 995 Pfam Protein kinase domain 689 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5520g00008 995 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 65 217 - -
Pral5520g00008 995 FunFam Leucine-rich repeat receptor-like protein kinase 218 319 - -
Pral5520g00008 995 Gene3D Phosphorylase Kinase; domain 1 670 772 - -
Pral5520g00008 995 SUPERFAMILY Protein kinase-like (PK-like) 676 966 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5520g00008 Pral-Chr5520 58758 63264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5520g00008 64 982 Receptor kinase-like Gene Family AT5G49660 65.699 0.0 1240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5520g00008 Pkinase 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5520g00008 - - qsa:O6P43_015448 1432.93