Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5520g00003 ATGATGACCAATCCGGAGTCTAGCCGCCACCAGCGGTCCAGAGCTCGGCCGTCTGCGGCGCGGACGCCAGCTCGGCCCAGGGTTCCGCTCAGGCAATTGCTTCGAGTGGCTTCTGTGGCTGGTGGTATTCAGTTTGGCTGGGCTCTGCAGCTCTCTCTTCTCACGCCATATGTACAGCAGCTCGGGATTTCTCACGCTTGGTCCAGTATCATATGGCTCTGTGGCCCTCTCTCTGGTCTCTTCGTTCAGCCTTTGGTTGGGCTCATGAGTGATCGCTGCACCAGCCGGTTCGGCCGCCGGAGACCGTTTATCTTGGCGGGAACATTGTCGATCGTTGCCGCGGTTCTGATCATTGGTTTCGCTGCTGACATTGGTTGGTTGCTCGGTGACACGGAGAATTCAAGGCCGCGAGCTGTGGCCTTTTTTGTGTTTGGCTTTTGGATTCTGGACATGGCCAACAACATAACTCAAGGTCCTTGTAGAGCTTTGCTTGCTGATCTCACTGGCAAGGATCATCGAAGGACACGTGTGGCAAATGCTTATTACTCTTTGTTTATGGCTATCGGTAACATTCTTGGCTATGCTACTGGATCATACAGTGGCTGGTTCAGAATTTTCTCTTTTACCTATACTCCTGCGTGCAATGTCAGTTGTGCAAATCTCAAGTCTGCTTTCTTTTTGGACATTATTTTCATTGTTGTCACCACGTATATCAGCATTAGTGCTGCTCATGAAGTGCCTTTAAGTTCAAACGGTGCACCTCATTCTGAAGAAGCAGGAGAGTCAGGTGGTGCAGGAGAAGCTTTCATGTGGGAGCTATTTGGGACATTCAGATATTTTTCGGCCCCTATATGGATAATTTTGTCTGTTACTGCTTTGACTTGGATTGGATGGTTTCCATTTATTCTCTTTGATACTGATTGGATGGGCCGAGAGATTTATGGGGGTGATCCAAATGAAGGCCCTAAGTATGATGCTGGAGTTAGAATGGGAGCACTTGGTTTATTGCTAAATTCAGTTGTTCTTGGAATAACATCATTGCTCATGGAGAGGCTTTGCCGGAAGCGAGGGGCTGGCTTTGTATGGGGAATTTCAAACATTCTAATGGCTATCTGCTTTATAGGAATGCTTGTGGTGACCTATGTAGCAAAAAGCATCGGTTATCTGGGCAAAGATCAACCACCAACTGGCATTGTGATTGTGTCTTTGATCATTTTTACAATTCTTGGGTTTCCTCTGTCGATCACTTACAGTGTTCCATACGCGTTGATTTCCTCACACATTGAGTCTCTAGGACTTGGCCAAGGGTTATCAATGGGTGTCCTAAATTTGGCGATAGTGATCCCTCAGATAGTGGTGTCCCTCGGAAGTGGACCTTGGGATCAGCTATTCGGTGGAGGGAATGCCCCAGCCTTTGCTGTGGCAGCTATTGCTGCACTAGTTAGTGGACTCATTGCAGTCTTGGCTATTCCTCGATCCGGTGGTCAAAAGCCCAGAACCCAAACATGA 1509 0.4824 MMTNPESSRHQRSRARPSAARTPARPRVPLRQLLRVASVAGGIQFGWALQLSLLTPYVQQLGISHAWSSIIWLCGPLSGLFVQPLVGLMSDRCTSRFGRRRPFILAGTLSIVAAVLIIGFAADIGWLLGDTENSRPRAVAFFVFGFWILDMANNITQGPCRALLADLTGKDHRRTRVANAYYSLFMAIGNILGYATGSYSGWFRIFSFTYTPACNVSCANLKSAFFLDIIFIVVTTYISISAAHEVPLSSNGAPHSEEAGESGGAGEAFMWELFGTFRYFSAPIWIILSVTALTWIGWFPFILFDTDWMGREIYGGDPNEGPKYDAGVRMGALGLLLNSVVLGITSLLMERLCRKRGAGFVWGISNILMAICFIGMLVVTYVAKSIGYLGKDQPPTGIVIVSLIIFTILGFPLSITYSVPYALISSHIESLGLGQGLSMGVLNLAIVIPQIVVSLGSGPWDQLFGGGNAPAFAVAAIAALVSGLIAVLAIPRSGGQKPRTQT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5520g00003 502 Gene3D MFS general substrate transporter like domains 26 489 IPR036259 -
Pral5520g00003 502 Pfam MFS/sugar transport protein 48 195 - -
Pral5520g00003 502 FunFam Sucrose transport protein 27 490 - -
Pral5520g00003 502 NCBIfam sucrose/proton symporter 28 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Pral5520g00003 502 SUPERFAMILY MFS general substrate transporter 31 495 IPR036259 -
Pral5520g00003 502 CDD MFS_SLC45_SUC 33 488 - -
Pral5520g00003 502 MobiDBLite consensus disorder prediction 1 23 - -
Pral5520g00003 502 PANTHER SUGAR TRANSPORTER 28 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5520g00003 Pral-Chr5520 26208 35382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5520g00003 1 498 Sucrose Transporter Gene Family AT1G09960 68.762 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5520g00003 K15378 - gmx:100787939 806.208