Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00060 ATGGTGGTGAGGAAAGTGGGGAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTTGCCAAAGTAAAGTTTGCGCAGAACACAGAGACCGGGGAGAGTGTCGCCATGAAAGTGCTCGATCGCAGCACCATCATCAAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCGTATGTCGTCCGTCTCCACGAGGTTCTAGCAAGCCGCACTAAGATCTATATCATATTGGAGTTCATTACAGGTGGCGAATTATTTGATAAAATAGTACACCATAGGCGTATTAGTGAAGCTGAATCAAGAAGATTCTTCCAACAGCTTATTGATGGTGTAGACTTCTGCCACAGCAAGGGAGTTTACCATAGAGATTTAAAGCCCGAAAATCTCTTACTTGATTCCCAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTTAGTATCCTTCGGACAACTTGTGGGACACCAAACTACGTAGCTCCTGAGGTAAATATAAGGGTACTGAGTCACAAGGGTTACAATGGGGCTATGGCAGACGTTTGGTCCTGTGGGGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACTATGTTATACAGTAAGATTGGTAGAGCAGAGTTTTCATACCCAGCCTGGTTTTCAGTGGGAGCAAAATCTTTAATACATAGAATTTTGGACCCCAATCCTCAGACTCGCATAACTATTGAGCAGATACGAAATGATGAGTGGTTTAAAAAAGGCTACGTTCCTGTAAGTCTACTTGAGCATGAAGAAGTAAATTTGGATGACGTAAATGCAGCTTTTGACGATGCTGAGGATCAGGCGGCTAATCAACAGAGTGAAAACGAAGACACGGGTCCTTTGATGCTCAATGCATTTGACTTGATAATCCTGTCTCAAGGCTTAAACCTGGCATCACTATTCGATCGTCGAGAGGACTCTATGTACTACCAAGCACGCTTTATCACTCAAAAGCCAGCAAAGGTGGTTTTATCGAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACTCATATTCGCAACTATAAGATGAGAGTGGAGGGTATTTCAGCAGACAGGACTTCTTATTTTTCGGTGATACTGGAAATTTTTGAAGTTGCTCCCACTTTTCTAATGGTGGACATTCAAAGAACCTCTGGAGATGGGAGTGAATACCTCAAGCAGTTTTACAAGACATTTTGCAGCAATCTTGAGGATATAATATGGAAACCGCCTCTTGAAGCATGCAAATCAAAGATGTCCAAGACTAAAAGCAAGAAACGTTAG 1356 0.4233 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHRRISEAESRRFFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVNIRVLSHKGYNGAMADVWSCGVILYVLLAGYLPFDELDLTMLYSKIGRAEFSYPAWFSVGAKSLIHRILDPNPQTRITIEQIRNDEWFKKGYVPVSLLEHEEVNLDDVNAAFDDAEDQAANQQSENEDTGPLMLNAFDLIILSQGLNLASLFDRREDSMYYQARFITQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISADRTSYFSVILEIFEVAPTFLMVDIQRTSGDGSEYLKQFYKTFCSNLEDIIWKPPLEACKSKMSKTKSKKR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00060 451 ProSiteProfiles Protein kinase domain profile. 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00060 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 417 - -
Pral5518g00060 451 Coils Coil 276 303 - -
Pral5518g00060 451 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Pral5518g00060 451 Pfam Protein kinase domain 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00060 451 SMART serkin_6 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00060 451 Gene3D Transferase(Phosphotransferase) domain 1 89 274 - -
Pral5518g00060 451 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Pral5518g00060 451 Gene3D Kinase associated domain 1, KA1 306 433 - -
Pral5518g00060 451 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Pral5518g00060 451 Pfam NAF domain 309 367 IPR004041 GO:0007165
Pral5518g00060 451 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Pral5518g00060 451 CDD CIPK_C 313 429 - -
Pral5518g00060 451 SUPERFAMILY Protein kinase-like (PK-like) 6 288 IPR011009 -
Pral5518g00060 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pral5518g00060 451 FunFam Non-specific serine/threonine protein kinase 307 432 - -
Pral5518g00060 451 FunFam Non-specific serine/threonine protein kinase 2 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00060 Pral-Chr5518 341606 346289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5518g00060 1 392 CBL-interacting serine-threonine protein kinases AT4G24400 80.612 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral5518g00060 Pkinase 1.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00060 - - tcc:18591854 764.992