Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00058 ATGGTGGTGAGGAAAGTGGGGAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTTGCCAAAGTAAAGTTTGCGCAGAACACAGAGACCGGGGAGAGTGTCGCCATGAAAGTGCTCGATCGCAGCACCATCATCAAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCGTATGTCGTCCGTCTCCACGAGGTTCTAGCAAGCCGCACTAAGATCTATATCATATTGGAGTTCATTACAGGTGGCGAATTATTTGATAAAATAGTACACCATAGGCGTATTAGTGAAGCTGAATCAAGAAGATTCTTCCAACAGCTTATTGATGGTGTAGACTTCTGCCACAGCAAGGGAGTTTACCATAGAGATTTAAAGCCCGAAAATCTCTTACTTGATTCCCAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTTAGTATCCTTCGGACAACTTGTGGGACACCAAACTACGTAGCTCCTGAGGTAAATATAAGGGTACTGAGTCACAAGGGTTACAATGGGGCTATGGCAGACGTTTGGTCCTGTGGGGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACTATGTTATACAGTAAGATTGGTAGAGCAGAGTTTTCATACCCAGCCTGGTTTTCAGTGGGAGCAAAATCTTTAATACATAGAATTTTGGACCCCAATCCTCAGACTCGCATAACTATTGAGCAGATACGAAATGATGAGTGGTTTAAAAAAGGCTACGTTCCTGTAAGTCTACTTGAGCATGAAGAAGTAAATTTGGATGACGTAAATGCAGCTTTTGACGATGCTGAGGCGGCTAATCAACAGAGTGAAAACGAAGACACGGGTCCTTTGATGCTCAATGCATTTGACTTGATAATCCTGTCTCAAGGCTTAAACCTGGCATCACTATTCGATCGTCGAGAGGACTCTATGTACTACCAAGCACGCTTTATCACTCAAAAGCCAGCAAAGGTGGTTTTATCGAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACTCATATTCGCAACTATAAGATGAGAGTGGAGGGTATTTCAGCAGACAGGACTTCTTATTTTTCGGTGATACTGGAAATTTTTGAAGTTGCTCCCACTTTTCTAATGGTGGACATTCAAAGAACCTCTGGAGATGGGAGTGAATACCTCAAGCAGTTTTACAAGACATTTTGCAGCAATCTTGAGGATATAATATGGAAACCGCCTCTTGAAGCATGCAAATCAAAGATGTCCAAGACTAAAAGCAAGAAACGTTAG 1350 0.423 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHRRISEAESRRFFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVNIRVLSHKGYNGAMADVWSCGVILYVLLAGYLPFDELDLTMLYSKIGRAEFSYPAWFSVGAKSLIHRILDPNPQTRITIEQIRNDEWFKKGYVPVSLLEHEEVNLDDVNAAFDDAEAANQQSENEDTGPLMLNAFDLIILSQGLNLASLFDRREDSMYYQARFITQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISADRTSYFSVILEIFEVAPTFLMVDIQRTSGDGSEYLKQFYKTFCSNLEDIIWKPPLEACKSKMSKTKSKKR 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00058 449 SUPERFAMILY Protein kinase-like (PK-like) 6 307 IPR011009 -
Pral5518g00058 449 ProSiteProfiles Protein kinase domain profile. 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00058 449 Coils Coil 276 303 - -
Pral5518g00058 449 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Pral5518g00058 449 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Pral5518g00058 449 Pfam NAF domain 307 365 IPR004041 GO:0007165
Pral5518g00058 449 SMART serkin_6 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00058 449 FunFam Non-specific serine/threonine protein kinase 2 306 - -
Pral5518g00058 449 Gene3D Transferase(Phosphotransferase) domain 1 89 274 - -
Pral5518g00058 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 415 - -
Pral5518g00058 449 Gene3D Kinase associated domain 1, KA1 304 431 - -
Pral5518g00058 449 Pfam Protein kinase domain 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00058 449 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Pral5518g00058 449 FunFam Non-specific serine/threonine protein kinase 305 430 - -
Pral5518g00058 449 CDD CIPK_C 311 427 - -
Pral5518g00058 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pral5518g00058 449 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00058 Pral-Chr5518 341606 346289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5518g00058 1 390 CBL-interacting serine-threonine protein kinases AT4G24400 80.563 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral5518g00058 Pkinase 1.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00058 - - gmx:100813117 758.829