Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5518g00057 ATGGTGGTGAGGAAAGTGGGGAAGTATGAGATTGGGAGGACGATTGGGGAGGGCACCTTTGCCAAAGTAAAGTTTGCGCAGAACACAGAGACCGGGGAGAGTGTCGCCATGAAAGTGCTCGATCGCAGCACCATCATCAAGCACAAAATGGTGGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGACATCCGTATGTCGTCCGTCTCCACGAGGTTCTAGCAAGCCGCACTAAGATCTATATCATATTGGAGTTCATTACAGGTGGCGAATTATTTGATAAAATAGTACACCATAGGCGTATTAGTGAAGCTGAATCAAGAAGATTCTTCCAACAGCTTATTGATGGTGTAGACTTCTGCCACAGCAAGGGAGTTTACCATAGAGATTTAAAGCCCGAAAATCTCTTACTTGATTCCCAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTACCAGAACAGGGGGTTAGTATCCTTCGGACAACTTGTGGGACACCAAACTACGTAGCTCCTGAGGTACTGAGTCACAAGGGTTACAATGGGGCTATGGCAGACGTTTGGTCCTGTGGGGTTATCCTTTATGTTCTGTTGGCTGGATATCTTCCCTTTGATGAACTTGATCTTACTATGTTATACAGTAAGATTGGTAGAGCAGAGTTTTCATACCCAGCCTGGTTTTCAGTGGGAGCAAAATCTTTAATACATAGAATTTTGGACCCCAATCCTCAGACTCGCATAACTATTGAGCAGATACGAAATGATGAGTGGTTTAAAAAAGGCTACGTTCCTGTAAGTCTACTTGAGCATGAAGAAGTAAATTTGGATGACGTAAATGCAGCTTTTGACGATGCTGAGGATCAGGCGGCTAATCAACAGAGTGAAAACGAAGACACGGGTCCTTTGATGCTCAATGCATTTGACTTGATAATCCTGTCTCAAGGCTTAAACCTGGCATCACTATTCGATCGTCGAGAGGACTCTATGTACTACCAAGCACGCTTTATCACTCAAAAGCCAGCAAAGGTGGTTTTATCGAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACTCATATTCGCAACTATAAGATGAGAGTGGAGGGTATTTCAGCAGACAGGACTTCTTATTTTTCGGTGATACTGGAAATTTTTGAAGTTGCTCCCACTTTTCTAATGGTGGACATTCAAAGAACCTCTGGAGATGGGAGTGAATACCTCAAGCAGTTTTACAAGACATTTTGCAGCAATCTTGAGGATATAATATGGAAACCGCCTCTTGAAGCATGCAAATCAAAGATGTCCAAGACTAAAAGCAAGAAACGTTAG 1344 0.4249 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHRRISEAESRRFFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAMADVWSCGVILYVLLAGYLPFDELDLTMLYSKIGRAEFSYPAWFSVGAKSLIHRILDPNPQTRITIEQIRNDEWFKKGYVPVSLLEHEEVNLDDVNAAFDDAEDQAANQQSENEDTGPLMLNAFDLIILSQGLNLASLFDRREDSMYYQARFITQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISADRTSYFSVILEIFEVAPTFLMVDIQRTSGDGSEYLKQFYKTFCSNLEDIIWKPPLEACKSKMSKTKSKKR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5518g00057 447 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00057 447 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 413 - -
Pral5518g00057 447 FunFam Non-specific serine/threonine protein kinase 303 428 - -
Pral5518g00057 447 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Pral5518g00057 447 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Pral5518g00057 447 SUPERFAMILY Protein kinase-like (PK-like) 6 284 IPR011009 -
Pral5518g00057 447 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Pral5518g00057 447 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Pral5518g00057 447 Gene3D Transferase(Phosphotransferase) domain 1 89 270 - -
Pral5518g00057 447 CDD CIPK_C 309 425 - -
Pral5518g00057 447 Coils Coil 272 299 - -
Pral5518g00057 447 FunFam Non-specific serine/threonine protein kinase 2 303 - -
Pral5518g00057 447 Pfam NAF domain 305 363 IPR004041 GO:0007165
Pral5518g00057 447 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5518g00057 447 Gene3D Kinase associated domain 1, KA1 302 429 - -
Pral5518g00057 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pral5518g00057 447 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5518g00057 Pral-Chr5518 341606 346289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5518g00057 1 388 CBL-interacting serine-threonine protein kinases AT4G24400 81.443 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral5518g00057 Pkinase 6.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5518g00057 - - tcc:18591854 770.77